FC930435

Overview
NameFC930435
Unique NameFC930435
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KI59C_DROME (Kinesin-like protein Klp59C OS=Drosophila melanogaster GN=Klp59C PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.994e-41
Identity = 103/216 (47.69%), Postives = 131/216 (60.65%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNS--RTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTIN-------LKESTTAPLSSALPTTSPYEDDTDAWPEQNERDDFDASEDSYEPEKPVWMKSGK 622
            G T AN +SSRSHA+ Q+ + RSA G      +L GK S IDLAG+ERGAD +  D+QTR+EG+EINKSLL LKECIRAL     H+PFRGSKLT+VLRDSF+G    +T MI+ ISP     EHTLNTLRYADRVK LS  + P K +  + +        + +S+T  L     +TS       A    N  +D + S+      KP +  SG+
Sbjct:  389 GHTSANSKSSRSHAVFQIVL-RSAAGE-----KLHGKFSLIDLAGNERGADNSSADRQTRLEGSEINKSLLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHSVEHTLNTLRYADRVKELSVESIPSKRMPDANLGSTSMSDIVCQSSTQRLFPCASSTSMPGGGNQAQQHTNTANDLNRSQK--PTSKPTYPTSGQ 596          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2C_CRIGR (Kinesin-like protein KIF2C OS=Cricetulus griseus GN=KIF2C PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.669e-41
Identity = 90/139 (64.75%), Postives = 103/139 (74.10%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSLS 415
            G T AN  SSRSHA  Q+ ++           RL GK S +DLAG+ERGADT+  D+QTRMEGAEINKSLLALKECIRAL  ++ H PFR SKLT+VLRDSF+G NSRT MI+ ISP    CE+TLNTLRYADRVK LS
Sbjct:  453 GQTFANSNSSRSHACFQILLRAKG--------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 583          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2A_BOVIN (Kinesin-like protein KIF2A OS=Bos taurus GN=KIF2A PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.710e-41
Identity = 99/190 (52.11%), Postives = 120/190 (63.16%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKD---ILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNERD 559
            G T AN  SSRSHA+ Q+ ++R          +L GK S IDLAG+ERGADT+  D+QTR+EGAEINKSLLA KECIRAL  ++ H PFR SKLT+VLRDSF+G NSRT MI+ ISP    CE+TLNTLRYA+RVK L+       D   I+    N  +   A        +SP  DD     EQNE +
Sbjct:  378 GQTSANAHSSRSHAVFQIILRRKG--------KLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLAHKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKELTVDPTAAGDVRPIMHHPPNQIDDLEAQWGVG---SSPQRDDLKLLCEQNEEE 556          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KI10A_DROME (Kinesin-like protein Klp10A OS=Drosophila melanogaster GN=Klp10A PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.710e-41
Identity = 87/138 (63.04%), Postives = 101/138 (73.19%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            G T AN  SSRSHA+ Q+ ++           ++ GK SFIDLAG+ERG DT+  D+QTRMEGAEINKSLLALKECIRAL     H+PFR SKLT+VLRDSF+G  S+T MI+ ISP    CEHTLNTLRYADRVK L
Sbjct:  479 GQTSANSNSSRSHAVFQIVLRPQGS------TKIHGKFSFIDLAGNERGVDTSSADRQTRMEGAEINKSLLALKECIRALGKQSAHLPFRVSKLTQVLRDSFIGEKSKTCMIAMISPGLSSCEHTLNTLRYADRVKEL 610          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2A_PONAB (Kinesin-like protein KIF2A OS=Pongo abelii GN=KIF2A PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.138e-40
Identity = 106/225 (47.11%), Postives = 128/225 (56.89%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVK-----------SLSKGNNPK-------KDILSSTINLKESTTAPLSSA---------------LPT-----TSPYEDDTDAWPEQNERD 559
            G T AN  SSRSHA+ Q+ ++R          +L GK S IDLAG+ERGADT+  D+QTR+EGAEINKSLLALKECIRAL  ++ H PFR SKLT+VLRDSF+G NSRT MI+ ISP    CE+TLNTLRYA+RVK           S   G+ P         D   S   +KE T  P ++                L T     +SP  DD     EQNE +
Sbjct:  424 GQTSANAHSSRSHAVFQIILRRKG--------KLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKEFGISPSDIPFSQGSGSRPDLSPSYEYDDFSPSVTRVKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLKLLCEQNEEE 640          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2C_RAT (Kinesin-like protein KIF2C OS=Rattus norvegicus GN=Kif2c PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.534e-40
Identity = 90/144 (62.50%), Postives = 104/144 (72.22%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNP 430
            G T AN  SSRSHA  Q+ ++           RL GK S +DLAG+ERGADT+  D+QTRMEGAEINKSLLALKE IRAL  ++ H PFR SKLT+VLRDSF+G NSRT MI+ ISP    CE+TLNTLRYADRVK LS  + P
Sbjct:  405 GQTFANSNSSRSHACFQILLRAKG--------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKESIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSPHSGP 540          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2A_XENLA (Kinesin-like protein KIF2A OS=Xenopus laevis GN=kif2a PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.534e-40
Identity = 98/196 (50.00%), Postives = 122/196 (62.24%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSL--SKGNNPKKDILSSTINLKESTTAPLSSALP-------TTSPYEDDTDAWPEQNERD 559
            G T AN  SSRSHA+ Q+ +++          ++ GK S IDLAG+ERGADT+  D+QTR+EGAEINKSLLALKECIRAL  ++ H PFR SKLT+VLRDSF+G NSRT MI+ ISP    CE+TLNTLRYA+RVK L  S+   P              T+ P +S +          +P  DD     EQNE +
Sbjct:  399 GQTSANAHSSRSHAVFQIILRKKG--------KMHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKELDPSRCRRPP----------PHDTSCPQTSWMTWKQCGEWGVAPQRDDLKLLCEQNEEE 576          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2C_XENLA (Kinesin-like protein KIF2C OS=Xenopus laevis GN=kif2c PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.323e-40
Identity = 88/147 (59.86%), Postives = 105/147 (71.43%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKD 439
            G T AN  SSRSHA LQ+ ++R +        +L GK S +DLAG+ERG DT   D+ TRMEGAEIN+SLLALKECIRAL  ++ H PFR SKLT++LRDSF+G NSRT MI+ +SP    CE+TLNTLRYADRVK LS  N    D
Sbjct:  463 GQTFANTSSSRSHACLQIILRRGS--------KLHGKFSLVDLAGNERGVDTASADRITRMEGAEINRSLLALKECIRALGQNKSHTPFRESKLTQILRDSFIGENSRTCMIAMLSPGFNSCEYTLNTLRYADRVKELSPQNAETND 601          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2B_BOVIN (Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.473e-37
Identity = 81/145 (55.86%), Postives = 102/145 (70.34%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPK 433
            G T  N  SSRSHA+ Q+ +K           +L GK S +DLAG+ERGADT   +++ ++EGAEINKSLLALKECIRAL  ++ H PFR SKLT+VLRDSF+G NS T MI+ ISP    CE+TLNTLRYA+RVK ++    P+
Sbjct:  414 GQTSVNAHSSRSHAVFQIILKSRG--------KLHGKFSLVDLAGNERGADTAKANRKRQLEGAEINKSLLALKECIRALGQNKSHTPFRASKLTQVLRDSFIGQNSSTCMIATISPGMASCENTLNTLRYANRVKEITLNLRPR 550          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF2B_MOUSE (Kinesin-like protein KIF2B OS=Mus musculus GN=Kif2b PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.965e-37
Identity = 83/144 (57.64%), Postives = 100/144 (69.44%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVG-NSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNP 430
            G T  N  SSRSHA+ QL +K           +L GK S +DLAG+ERGADT    ++ ++EGAEINKSLLALKECIRAL  ++ H PFR SKLT+VLRDSF+G NS T MI+ ISP    CE+TLNTLRYA+RVK L+    P
Sbjct:  414 GQTSVNAHSSRSHAVFQLILKAGG--------KLHGKFSLVDLAGNERGADTAKATRKRQLEGAEINKSLLALKECIRALGKNKSHTPFRASKLTQVLRDSFIGQNSYTCMIATISPGMTSCENTLNTLRYANRVKELALEARP 549          
The following BLAST results are available for this feature:
BLAST of FC930435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KI59C_DROME2.994e-4147.69Kinesin-like protein Klp59C OS=Drosophila melanoga... [more]
KIF2C_CRIGR6.669e-4164.75Kinesin-like protein KIF2C OS=Cricetulus griseus G... [more]
KIF2A_BOVIN8.710e-4152.11Kinesin-like protein KIF2A OS=Bos taurus GN=KIF2A ... [more]
KI10A_DROME8.710e-4163.04Kinesin-like protein Klp10A OS=Drosophila melanoga... [more]
KIF2A_PONAB1.138e-4047.11Kinesin-like protein KIF2A OS=Pongo abelii GN=KIF2... [more]
KIF2C_RAT2.534e-4062.50Kinesin-like protein KIF2C OS=Rattus norvegicus GN... [more]
KIF2A_XENLA2.534e-4050.00Kinesin-like protein KIF2A OS=Xenopus laevis GN=ki... [more]
KIF2C_XENLA4.323e-4059.86Kinesin-like protein KIF2C OS=Xenopus laevis GN=ki... [more]
KIF2B_BOVIN4.473e-3755.86Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B ... [more]
KIF2B_MOUSE9.965e-3757.64Kinesin-like protein KIF2B OS=Mus musculus GN=Kif2... [more]

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Properties
Property NameValue
Genbank descriptionC34007E07EF PostHarvC1 Citrus clementina cDNA clone C34007E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930435 ID=FC930435; Name=FC930435; organism=Citrus clementina; type=EST; length=746bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGTTTTAAGAATTTCAATCAGATGACAATTTGAATGC
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