FC930435

Overview
NameFC930435
Unique NameFC930435
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF4A_HUMAN (Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23
Identity = 66/155 (42.58%), Postives = 92/155 (59.35%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQ--GHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINL 463
            +T  N +SSRSHAI  +++++     ++   R   KL  +DLAGSER   T     + + EG  IN+ LL L   I AL +D+  G +P+R SKLT +L+DS  GNS T+MI+C+SP+    E TLNTLRYADR + +   N P  +I   T  L
Sbjct:  202 STAMNSQSSRSHAIFTISLEQRKKSDKNSSFR--SKLHLVDLAGSERQKKTKAEGDRLK-EGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIK--NKPIVNIDPQTAEL 351          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF12_HUMAN (Kinesin-like protein KIF12 OS=Homo sapiens GN=KIF12 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23
Identity = 85/235 (36.17%), Postives = 115/235 (48.94%), Query Frame = 2
Query:   17 NEESSRSHAILQLAIKR-------SADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL---DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNER-----DDFDASEDSYEPEKPVWMKS---GKLEQFNLPSAQDQLRK 667
            N+ SSRSHA+L L I R       S D  E   P + GKL F+DLAGSE+ A  T +  +  +E   IN+SLLAL  CI  L      Q HIPFR SKLT++L DS  G   T+M++C+SPS+ C   TL+TLRYA R + ++    P+               AP S         E +     E+N R     D  D         +  W +    G L++F L +  ++LRK
Sbjct:  223 NQASSRSHALLTLYISRQTAQQMPSVDPGE---PPVGGKLCFVDLAGSEKVA-ATGSRGELMLEANSINRSLLALGHCISLLLDPQRKQSHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASRAQRVT--TRPQ---------------APKSPVAKQPQRLETEMLQLQEENRRLQFQLDQMDCKASGLSGARVAWAQRNLYGMLQEFMLEN--ERLRK 434          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF17_HUMAN (Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.155e-23
Identity = 63/145 (43.45%), Postives = 93/145 (64.14%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPK 433
            G T  N++SSRSH+I  ++I+ SA     K     GKL+ +DLAGSER + T    ++ + E  +IN SL AL   I AL D    H+P+R SKLT +L+DS  GN++T+M++C+SP+    + TL+TLRYA+R K++   N P+
Sbjct:  199 GYTLMNKDSSRSHSIFTISIEMSAVDERGKDHLRAGKLNLVDLAGSERQSKTGATGERLK-EATKINLSLSALGNVISALVDGRCKHVPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANRAKNIR--NKPR 340          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KLP6_SCHPO (Kinesin-like protein 6 OS=Schizosaccharomyces pombe GN=klp6 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.815e-23
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPP-------RLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL--DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            T AN  SSRSHA+LQ+ I ++    E +         ++    SFIDLAGSER + T +  K+  +EGA IN+SLLAL  CI +L     + H+P+R SKLT +L+ S  GN RT MI CISPSS   + T NTL+Y +R K++
Sbjct:  247 TEANAVSSRSHAVLQIYITQTPKSGEKQEESESQNSHKVRSVFSFIDLAGSERASATKNRGKRL-VEGANINRSLLALGNCINSLCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCMIVCISPSSEHYDETHNTLKYGNRAKNI 389          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KI18A_HUMAN (Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF18A PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.815e-23
Identity = 67/161 (41.61%), Postives = 95/161 (59.01%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTR-MEGAEINKSLLALKECIRALDNDQG---HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTT 478
            T  N  SSRSHA+ Q+ +++    +       + K+S IDLAGSER +  T   K TR +EG  IN+SLLAL   I AL + +    HIP+R SKLT +L+DS  GN +T+MI+ +SPSS   + T NTL+YA+R K +      K  + S+ +N+    T
Sbjct:  219 TDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERAS--TSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI------KSSLKSNVLNVNNHIT 371          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF4_MOUSE (Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.801e-23
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 2
Query:    5 TTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRALDNDQ--GHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSL 412
            +T  N +SSRSHAI  ++I++     ++   R   KL  +DLAGSER   T     + R EG  IN+ LL L   I AL +D+    +P+R SKLT +L+DS  GNS T+MI+C+SP+    E TLNTLRYADR + +
Sbjct:  203 STAMNSQSSRSHAIFTISIEQRKKNDKNSSFR--SKLHLVDLAGSERQKKTKAEGDRLR-EGININRGLLCLGNVISALGDDKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKI 337          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: OSM3_CAEEL (Osmotic avoidance abnormal protein 3 OS=Caenorhabditis elegans GN=osm-3 PE=2 SV=4)

HSP 1 Score: 107.842 bits (268), Expect = 6.271e-23
Identity = 72/205 (35.12%), Postives = 114/205 (55.61%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSS-----ALPTTSPYEDDTDAWPEQNE-RDDFDASEDSYEPE 595
            G T  N++SSRSH+I  + ++   +    +    +GKL+ +DLAGSER + T     + + E  +IN SL AL   I AL D    HIP+R SKLT +L+DS  GN++T+MI+C+SPSS   + TL+TLRYA+R K++       +D   + +   +   A L S     A+   +P +D      E+ + R++F+ + +    E
Sbjct:  195 GATLMNKDSSRSHSIFTVYVEGMTETGSIR----MGKLNLVDLAGSERQSKTGATGDRLK-EATKINLSLSALGNVISALVDGKSKHIPYRDSKLTRLLQDSLGGNTKTIMIACVSPSSDNYDETLSTLRYANRAKNIKNKPTINEDPKDALLREYQEEIARLKSMVQPGAVGVGAPAQDAFSIEEERKKLREEFEEAMNDLRGE 394          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF3A_MACFA (Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.271e-23
Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNERDDFDASEDSYEPEK 598
            G T  NE SSRSHAI  + I+ S  G +      +GKL  +DLAGSER A T    ++ + E  +IN SL  L   I AL D    H+P+R SKLT +L+DS  GNS+T+M + I P+    + T++TLRYA+R K++       +D   + +   +     L   L           +  E+++ ++ +  ED  + +K
Sbjct:  209 GATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLK-EATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEDDDEEGEVGEDGEKRKK 407          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KIF3A_HUMAN (Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 6.271e-23
Identity = 68/200 (34.00%), Postives = 104/200 (52.00%), Query Frame = 2
Query:    2 GTTGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRMEGAEINKSLLALKECIRAL-DNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINLKESTTAPLSSALPTTSPYEDDTDAWPEQNERDDFDASEDSYEPEK 598
            G T  NE SSRSHAI  + I+ S  G +      +GKL  +DLAGSER A T    ++ + E  +IN SL  L   I AL D    H+P+R SKLT +L+DS  GNS+T+M + I P+    + T++TLRYA+R K++       +D   + +   +     L   L           +  E+++ ++ +  ED  + +K
Sbjct:  209 GATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRLK-EATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEISGSDISGSEEDDDEEGEVGEDGEKRKK 407          
BLAST of FC930435 vs. ExPASy Swiss-Prot
Match: KI18A_MOUSE (Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.271e-23
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 2
Query:    8 TGANEESSRSHAILQLAIKRSADGSESKPPRLVGKLSFIDLAGSERGADTTDNDKQTR-MEGAEINKSLLALKECIRALDNDQG---HIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNPKKDILSSTINL 463
            T  N  SSRSHA+ Q+ +++    +       + K+S IDLAGSER +      K +R +EG  INKSLLAL   I AL N +    HIP+R SKLT +L+DS  GN +T+MI+ +SPSS   + T NTL+YA+R K +      K  + S+ +NL
Sbjct:  219 TDVNAVSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERAS--VSGAKGSRFVEGTNINKSLLALGNVINALANTKRRNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSLFYDDTYNTLKYANRAKEI------KSSLKSNVLNL 366          
The following BLAST results are available for this feature:
BLAST of FC930435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIF4A_HUMAN1.650e-2342.58Chromosome-associated kinesin KIF4A OS=Homo sapien... [more]
KIF12_HUMAN1.650e-2336.17Kinesin-like protein KIF12 OS=Homo sapiens GN=KIF1... [more]
KIF17_HUMAN2.155e-2343.45Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF1... [more]
KLP6_SCHPO2.815e-2345.83Kinesin-like protein 6 OS=Schizosaccharomyces pomb... [more]
KI18A_HUMAN2.815e-2341.61Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF... [more]
KIF4_MOUSE4.801e-2344.93Chromosome-associated kinesin KIF4 OS=Mus musculus... [more]
OSM3_CAEEL6.271e-2335.12Osmotic avoidance abnormal protein 3 OS=Caenorhabd... [more]
KIF3A_MACFA6.271e-2334.00Kinesin-like protein KIF3A OS=Macaca fascicularis ... [more]
KIF3A_HUMAN6.271e-2334.00Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3... [more]
KI18A_MOUSE6.271e-2342.95Kinesin-like protein KIF18A OS=Mus musculus GN=Kif... [more]

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Properties
Property NameValue
Genbank descriptionC34007E07EF PostHarvC1 Citrus clementina cDNA clone C34007E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930435 ID=FC930435; Name=FC930435; organism=Citrus clementina; type=EST; length=746bp
GGGTACAACTGGTGCTAATGAGGAATCCTCCCGTTCACATGCCATACTTC
AGCTTGCTATCAAGAGGTCAGCTGATGGTAGTGAATCAAAGCCTCCTCGA
CTTGTTGGCAAGCTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGC
TGATACTACAGACAACGATAAACAGACAAGAATGGAAGGAGCAGAGATAA
ATAAGAGCTTGCTTGCACTAAAGGAATGCATAAGAGCTCTTGACAATGAT
CAGGGTCACATTCCTTTCAGAGGCAGTAAATTAACTGAGGTTCTGAGGGA
TTCATTTGTTGGCAATTCACGCACGGTTATGATATCATGCATTTCACCAA
GCTCAGGGTGTTGTGAACACACTCTCAACACATTAAGATATGCCGACAGA
GTGAAGAGTCTTTCAAAAGGGAACAATCCTAAAAAGGACATACTGTCTTC
AACCATAAATTTGAAGGAGTCAACTACTGCACCCTTATCTTCAGCTCTAC
CAACAACATCCCCTTATGAGGATGACACTGATGCATGGCCTGAACAAAAT
GAAAGAGATGATTTTGACGCATCAGAGGATTCCTATGAACCAGAGAAGCC
GGTATGGATGAAAAGTGGGAAGCTAGAGCAATTCAATCTCCCTTCTGCAC
AGGATCAATTACGAAAACCACCCAATGGTCAGACAAGGTGGAAGGAGCAG
CCAAAATCTGGTTTTAAGAATTTCAATCAGATGACAATTTGAATGC
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