FC930436

Overview
NameFC930436
Unique NameFC930436
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930436 vs. ExPASy Swiss-Prot
Match: EF1G_SCHPO (Elongation factor 1-gamma OS=Schizosaccharomyces pombe GN=tef3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.139e-15
Identity = 57/171 (33.33%), Postives = 88/171 (51.46%), Query Frame = 3
Query:  189 AEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYF 698
            A  AGVEV   E+ ++   N   +     PL K+PV    DG P+ E+ AIA Y+A L     L G++  + A V Q+  F+  E+       + PR+    Y   A + A  A+       +  LAS TYLVG  +TLADI   C L +G  +++TK++ +++ H+ RY+
Sbjct:   22 AAVAGVEV---EHVDVQPHNFPADLAAKFPLQKMPVFVGKDGFPLSETLAIAFYLASLNKTRALNGTTAEEKAKVLQYCSFTNSELPGAFRPIIAPRVFGAPYDEQAAKEAETAIALIFARFDEELASKTYLVGSRLTLADIFFTCFLKFGATYVLTKSYLAKYTHIYRYY 189          
BLAST of FC930436 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 59/168 (35.12%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  147 VGQENKNGFKGLIAAEYAGVEVKLAENFEMGVTNKSPEFLK-MNPLGKVPVLETPDGPVFESNAIARYVARL-KADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFK 644
            V  EN    K L AA  A V V L +  E G  N++ E+ +  +P G+ PVL+T +G VFESNAI R++ARL ++   L G + ++ + V+ W+DFSA E+DA    +++      +  PL    A+  +   L AL   L + T+LVG  +T+AD+ +   L + ++
Sbjct:    9 VNPENARTHKLLAAAALANVAVTL-KACEYGRENETAEYCRNCSPCGRYPVLQTEEGCVFESNAILRHIARLDRSGGFLYGRTPLEGSQVDMWLDFSATELDAASEPFVHHA---FRGEPL-PANAMDRVHEVLRALEAWLETRTFLVGERMTVADVAVAFALQWHYR 171          
BLAST of FC930436 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  174 KGLIAAEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEID----ANISRWLY-PRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADI 611
            + L+A E AGV+ +L         ++ PE L  NP GKVPVLE  D  +FES AIAR+V R      L G  L   A V+ W++  A ++     A +   ++ P LG  +   + +E  V  LK+ L+     LA+ TYL G  ++LAD+
Sbjct:   19 RALLALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKPELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDEN-VEKLKKVLEVYEARLATCTYLAGDFLSLADL 168          
BLAST of FC930436 vs. ExPASy Swiss-Prot
Match: STCT_EMENI (Putative sterigmatocystin biosynthesis protein stcT OS=Emericella nidulans GN=stcT PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  258 EFLKMNPLGKVPVLETPDGPVF-ESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQY----IPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYF 698
            E+L++NPLGK+P     DG V  ES AIA Y     ++  L G++  +YA + +WM F   EI   +  W  P +G   +    I  +++  +A LK     L+ HL    YLVG +++LAD+ ++  +   F+  + K +  E  ++  +F
Sbjct:   43 EYLQLNPLGKIPTFVGADGYVLTESIAIALY----DSNTTLLGTTGQEYASIIRWMAFGITEILPALGGWFNPLIGRANFNADNIYQSKDDTLARLK----ILDNHLCGREYLVGETLSLADLFVLGIVQGAFRFFLDKRWRDEHRNLSTWF 186          
The following BLAST results are available for this feature:
BLAST of FC930436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
EF1G_SCHPO1.139e-1533.33Elongation factor 1-gamma OS=Schizosaccharomyces p... [more]
EF1G_TRYCR1.943e-1535.12Elongation factor 1-gamma OS=Trypanosoma cruzi PE=... [more]
GSTF4_MAIZE6.249e-1435.76Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
STCT_EMENI1.702e-1130.92Putative sterigmatocystin biosynthesis protein stc... [more]

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Properties
Property NameValue
Genbank descriptionC34007E08EF PostHarvC1 Citrus clementina cDNA clone C34007E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930436 ID=FC930436; Name=FC930436; organism=Citrus clementina; type=EST; length=703bp
CTCCACAAAAACCCTAGTTCGCTTCTTTTTGTCGCTCTCTTTTTTTTAAA
CTCCCAGTCGCTCTGTGGCCTTTCAGGAGAACGCTCGCATTCATCTGTAA
TTTGAGCGAATCGTTTCTCCGTTAAGCCATGGCTCTGGTCTTGCATGTTG
GGCAGGAAAACAAAAATGGATTCAAAGGACTCATTGCTGCTGAGTACGCT
GGTGTGGAAGTCAAATTGGCTGAGAATTTTGAGATGGGTGTCACTAATAA
ATCCCCTGAATTTTTGAAGATGAACCCTCTTGGGAAGGTTCCTGTGTTGG
AGACACCTGATGGTCCGGTTTTTGAGAGCAATGCCATTGCCCGTTATGTT
GCACGTCTGAAAGCTGACAATCAACTATGTGGTTCTTCTCTGATCGATTA
TGCTCATGTTGAGCAGTGGATGGATTTTTCTGCCATGGAGATTGATGCTA
ATATCTCCAGGTGGTTATATCCAAGACTTGGATATATGCAATACATTCCT
CTGGCTGAGGAAGGTGCTGTTGCCGCACTGAAGAGAGCATTGGATGCTTT
GAACATTCATTTGGCTTCAAATACGTACTTGGTTGGCCATTCTGTCACCC
TGGCTGACATTGTCATGATATGCAATTTATATTATGGATTTAAGCACATC
ATGACGAAGACTTTCACCTCTGAGTTTCCCCATGTTGAGAGATACTTTTG
GAC
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