FC930444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_BORBR (Phosphoenolpyruvate carboxylase OS=Bordetella bronchiseptica GN=ppc PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.102e-31 Identity = 84/242 (34.71%), Postives = 129/242 (53.31%), Query Frame = 2 Query: 29 VISMASNASDVLAVELLQKDARL-AVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRP------PQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 ++S SD+L V +LQK+A L A GE PG L VVPLFET+ DL+ ++ L + R+ + QEVM+GYSDS KD G T+ W LY+A+ +V + +++ +FH +Y AI +QPPG+V G LR TEQGE++Q+K+ + LE+ A L +++ P + ++ M +S+++ + YR VY+ P F YF ATP +E+ Sbjct: 540 IVSHTETLSDLLEVLVLQKEAGLIAPPGET--IAPGDGLMVVPLFETIPDLQRGPEIMAAWLDLPEVRQRVRLAQGDTQEVMLGYSDSNKDGGFLTSNWSLYQAERALVDVFSARSVRLRMFHGRGGSVGRGGGSSYDAILAQPPGTVAGQLRLTEQGEVIQSKYKDAEVGRWHLELLVAATLESSLAPQAAATSAEDAHMQQHAPAMSFMSELAQRTYRGLVYDTPGFADYFFAATPISEI 779
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_THET8 (Phosphoenolpyruvate carboxylase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ppc PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30 Identity = 93/239 (38.91%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 20 GPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 G +V+SM + D+LAV LL ++ L GRP P VVPLFET+ DLR A V+R+LL + H G EVM+GYSDS KDAG A LY+AQE + E G+ V FH P AI S PP SV +R TEQGE + ++ P AVR LE LA + P Q P E +WR + + ++ S + YR+ + E F +F TP E+G Sbjct: 448 GAHVVSMTHHPEDLLAVFLLAREVGLY---RPGRPLP---FDVVPLFETLEDLRRAPGVLRRLLENPVFLAHA--RGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPVYFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRYSHPDLAVRHLEQMLYHFALAALGPGQEP-EARWREALAQAAEESTRRYRALLQEE-GFFDFFEAFTPIREIG 676
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_THET2 (Phosphoenolpyruvate carboxylase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ppc PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30 Identity = 93/239 (38.91%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 20 GPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 G +V+SM + D+LAV LL ++ L GRP P VVPLFET+ DLR A V+R+LL + H G EVM+GYSDS KDAG A LY+AQE + E G+ V FH P AI S PP SV +R TEQGE + ++ P AVR LE LA + P Q P E +WR + + ++ S + YR+ + E F +F TP E+G Sbjct: 448 GAHVVSMTHHPEDLLAVFLLAREVGLY---RPGRPLP---FDVVPLFETLEDLRRAPGVLRRLLENPVFLAHA--RGRGGVEVMIGYSDSNKDAGFLMANLALYEAQEALSRVGEEVGLPVYFFHGRGTSTARGGGPAGRAIASLPPRSVGRRIRLTEQGEALADRYSHPDLAVRHLEQMLYHFALAALGPGQEP-EARWREALAQAAEESTRRYRALLQEE-GFFDFFEAFTPIREIG 676
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_METEA (Phosphoenolpyruvate carboxylase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=ppc PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.035e-30 Identity = 73/187 (39.04%), Postives = 103/187 (55.08%), Query Frame = 2 Query: 11 DSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAV 571 ++ G +++SM + DVL LL K+A + + CP L +VPLFET+ DLR A ++++LL I R+ + G QEVM+GYSDS KD G + WELYKAQ + N G+ + FH PT+ I +QPPGS+ G R TEQGE+V K+ TA Q+E+ +V Sbjct: 491 EAFGAFILSMTRSTVDVLGAYLLAKEAGIFLDTTGTEICP---LPIVPLFETIDDLRAAPAIMKELLGIPVVRRST-RWQGGVQEVMIGYSDSNKDGGFIASNWELYKAQVRLTTLGNHLGVPIAFFHGRGGSVSRGGVPTHRGIAAQPPGSIQGRFRITEQGEVVSFKYANRGTAAYQMELLAASV 673
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_CAUCR (Phosphoenolpyruvate carboxylase OS=Caulobacter crescentus GN=ppc PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.570e-29 Identity = 82/243 (33.74%), Postives = 122/243 (50.21%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G LG Y+IS ++ SD+L +L K L G P +++V PLFET+ DL V+R+ L + R I QE+M+GYSDS KD G + + + + G+ + LFH P A+ +QP G+V G +R TEQGEM+ +FG TA R L+ AVL+A+ R P P R+ K M +++ S + YR+ VY++ F +F TP +E+ Sbjct: 488 GHGCLGAYIISKSATLSDMLEPLVLLKQVGLVWGGA----APRASVKVAPLFETIGDLENGPAVLRQWLELPLSRT--ILGDRPVQEIMLGYSDSNKDGGYVASRRGVATGASALAHEADRMGVGLQLFHGRGGSVGRGGGPAAEAVLAQPAGTVQGRIRMTEQGEMIARRFGDQPTARRNLDGLAAAVLMASER-PIPKRDPKVEGAMTALAQSSFEGYRALVYDDAAFEDFFWSVTPISEI 723
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_STRCO (Phosphoenolpyruvate carboxylase OS=Streptomyces coelicolor GN=ppc PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 78/247 (31.58%), Postives = 128/247 (51.82%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREE----KWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G + + Y+ISM A DV A +L ++A G + + +VPL ET +L+ A ++ LL+ YR+ ++ QEVM+GYSDS K G T+ WE+++AQ + + +G+++ LFH PT+ AI +QP G++ G ++ TEQGE++ K+ +P A LE+ A L A+ P + + +W M+ +S + YR V E+P+ YF +TP +L Sbjct: 479 GPEVIESYIISMCQGADDVFAAAVLAREA-----GLIDLHAGWAKIGIVPLLETTDELKAADTILEDLLADPSYRR-LVALRGDVQEVMLGYSDSSKFGGITTSQWEIHRAQRRLRDVAHRYGVRLRLFHGRGGTVGRGGGPTHDAILAQPWGTLEGEIKVTEQGEVISDKYLIPALARENLELTVAATLQASALHTAPRQSDEALARWDAAMDVVSDAAHTAYRHLV-EDPDLPTYFLASTPVDQL 718
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_STRAW (Phosphoenolpyruvate carboxylase OS=Streptomyces avermitilis GN=ppc PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 78/247 (31.58%), Postives = 128/247 (51.82%), Query Frame = 2 Query: 5 GSDSLGPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREE----KWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAEL 733 G + + Y+ISM A DV A +L ++A G L + +VPL ET +L+ A ++ +LS YR+ ++ QEVM+GYSDS K G T+ WE+++AQ + + +G+++ LFH P++ AI +QP G++ G ++ TEQGE++ K+ +P A LE+ A L A+ P + + +W M+ +S + YR V E+P+ YF +TP +L Sbjct: 478 GPEVIESYIISMCQGADDVFAAAVLAREA-----GLLDLHAGWAKIGIVPLLETTDELKAADTILEDMLSDPSYRR-LVALRGDVQEVMLGYSDSSKFGGITTSQWEIHRAQRRLRDVAHRYGVRLRLFHGRGGTVGRGGGPSHDAILAQPWGTLEGEIKVTEQGEVISDKYLVPSLARENLELTVAATLQASALHTAPRQSDEALARWDAAMDVVSDAAHSAYRRLV-EDPDLPTYFLASTPVDQL 717
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_THES7 (Phosphoenolpyruvate carboxylase OS=Thermus sp. (strain 71) GN=ppc PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.140e-27 Identity = 89/239 (37.24%), Postives = 117/239 (48.95%), Query Frame = 2 Query: 20 GPYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPPQPPREEKWRNLMEEISKISCQNYRSTVYENPEFLAYFHEATPQAELG 736 G +V+SM + +D+LAV LL ++ L G+P P VVPLFET+ DL A V+R+LL+ +R H G EVM+GYSDS KDAG A LY+AQE + A GI V FH P AI PP SV LR TEQGE + ++ P AVR LE A + P+ WR + E + S YR+ + + F +F TP E+G Sbjct: 447 GAHVVSMTHHPADLLAVFLLAREVGLY---RPGKPLP---FDVVPLFETLEDLERAPEVLRRLLANPVFRAHA--QGRGGVEVMIGYSDSNKDAGFLMANLALYQAQEALHAVGEAQGIPVFFFHGRGTSTARGGGPAGRAIAGLPPKSVGHRLRLTEQGEALADRYAHPDLAVRHLEQLLYHFAQAALGDGVEPKAH-WREALGEAGERSMARYRALLSQE-GFFPFFEAFTPIREIG 675
BLAST of FC930444 vs. ExPASy Swiss-Prot
Match: CAPP_RHOMR (Phosphoenolpyruvate carboxylase OS=Rhodothermus marinus GN=ppc PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.659e-26 Identity = 83/246 (33.74%), Postives = 120/246 (48.78%), Query Frame = 2 Query: 17 LGPYVISMASNASDVLAVELLQKDARL---AVSGELGRP----CPGGTLRVVPLFETVTDLRGAGLVIRKLLSIDWYRKHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEFGIKVTLFHXXXXXXXXXXXPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATMRPP---QPPREEKWRN-LMEEISKISCQNYRSTVYENPEFLAYFHEATP 721 +G Y++SM SD+L LL K+ L G+P CP + VPLFET+ DL A + +LS YR + G QE+M+GYSDS KD G + A W L++AQE + C G+ LFH AI + PP G +R TEQGE++ ++ LP+ A R LE A+L P + RN LM+E++ S + YR + + P+F +++ TP Sbjct: 500 VGSYIVSMTHTVSDLLEPMLLAKEVGLWHYERDPRTGKPGHVRCP---IDFVPLFETIEDLEAAASRMEAILSHPVYRMQVAAR-GGFQEIMLGYSDSTKDGGYWMANWALHRAQEQLAEVCLRHGVDFRLFHGRGGTVGRGGGRANQAILAMPPVVHNGRIRFTEQGEVISFRYALPEIAHRHLEQIVNAMLRVVGLPAASGTDGTDPATRNRLMDELAARSMRAYRRLI-DAPDFWSWYTRITP 740 The following BLAST results are available for this feature:
BLAST of FC930444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 229
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930444 ID=FC930444; Name=FC930444; organism=Citrus clementina; type=EST; length=736bpback to top |