FC930447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.762e-28 Identity = 72/196 (36.73%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDD--ISRGESSSLALKGAQ 707 YD TIFSPEGRLYQVEYA +A+ +AG ++IG+ KD V +V +KKV KLL TS ++ I ++ G+ +DA L+ AR +A + + + MPV+ L + + D Q YTQ +RP GV + G+D+ QL+ DP+G++ G K + L++ KDD S E+ +A+ Q Sbjct: 9 YDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQ 203
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.324e-27 Identity = 74/201 (36.82%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQ 710 YD FSPEGRL+QVEYA+EAI +AIGI + +GVVL EK++TS L+ ST EK+ ++D H+ CA +G+M+DA LI ARV+ Q + + Y E M +E Q++ + G RPFGV+ LFAG + QL+ DPSG + L+ ++ D++ E+ ++L +Q Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQP-QLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQ 206
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.324e-27 Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD FSPEGRL+QVEYA+EA+ ++IGI + +GV+L EK+ TSKL+ + + EK+ K+D H+ AG+++D+ L+ A+++AQ + + Y + VE + QS+ + QFG RPFGV+ LFAG D+ G +L+ DPSG + K LK+ Y D ++ E +AL Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLM-VNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA---LQFGDDDVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMAL 198
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 67/193 (34.72%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 120 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 S +D TIFSPEGRLYQVEYA +AI + + + S D V+ +KKVT K + T T +++I + CA+ G ++D+ + AR +A + Y Y MPV+ L + + D Q YTQ +RP G S + +D G +Y +DP+G + G+K S L++ YK ++S ++ LA+ Sbjct: 6 SAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTH-LFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAI 197
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 70/181 (38.67%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDIS 668 YD TIFSPEGRL+QVEYA +A+ AG ++IG+ KD V +V +KKV KLL S+ T ++ I ++ GI +DA L+ AR QA + + Y MPV+ L + + D Q YTQ +RP GV + G D+ G LY DP+G++ G K + L++ K++ S Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH-LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPS 188
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 70/160 (43.75%), Postives = 99/160 (61.88%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG--------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 584 YD FSPEGRL+QVEYA+E +AIGI + +GV L EK++TS L++ S S EK+ +ID H+ CA++G+++DA LI+ ARV+ Q + + Y E M VE + Q++ + QFG RPFGV+ LF G D+ G QL+ DPSG + Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA---LQFGEEDADPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTF 162
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 73/200 (36.50%), Postives = 106/200 (53.00%), Query Frame = 3 Query: 117 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQ-RYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 M+ +Y T FSP G+L Q+EYA+ A+ +++GI + DGVVL EKK TS+ L S EK+ I + +G+ D +L++ +R AQ Y Y E P + LVQ + Q TQ GG+RPFGVS L AG D+ G LY DPSG Y WK + L++ Y D++ ++ A+ ++T Sbjct: 1 MTDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSE-LAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEK-GPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKET 198
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA1_TRYCR (Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27 Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 596 +YD+ TT +SP GRL+QVEYA EA+ N +A+G +KD VVL K+ S + Q S+ EK++K+DDHV A+AG+++D +L R + Y Y + P+ + + + + Q + QF G RPFGV L AG+D G LY + PSG+ +K Sbjct: 5 QYDTNTTTWSPTGRLFQVEYANEAVNNGSAAVGAKNKDFVVLTALKR--SPVAQFSSYQEKVFKLDDHVGMAIAGLVADGRMLARFVRTECMNYRYMHDSDNPLPLIAEIVGEKYQRHIQFAGKRPFGVGLLIAGYDST-GPHLYHTVPSGDVFDFK 158
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27 Identity = 59/160 (36.88%), Postives = 97/160 (60.62%), Query Frame = 3 Query: 117 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 596 M++RYD TI+SP+G L QVEYA EA+ + +G+ + + +V+ EK+ L Q K+ +DDHV +G+ +DA IL++ A+++AQ + +++P VE + + + KQ YTQ G RPFG+S L G+D++ L+ +DPSG + W+ Sbjct: 1 MAQRYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDL-QEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWR 159
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27 Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 584 +YD+ T +SP GRL+QVEYAMEA+ +AIG+ S+ VVL K S+L S+ K++K+DDH+ A+AG+ +D +L R ++ +++ Y+ P+PV +LV L D Q TQ RP+GV L G D++ G LY + PSGNY Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL---SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDES-GAHLYYNCPSGNY 153 The following BLAST results are available for this feature:
BLAST of FC930447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930447 ID=FC930447; Name=FC930447; organism=Citrus clementina; type=EST; length=714bpback to top |