FC930447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.834e-43 Identity = 87/195 (44.62%), Postives = 129/195 (66.15%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+DDI + ++ LA+ +T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKT 201
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.537e-42 Identity = 85/189 (44.97%), Postives = 128/189 (67.72%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD T+FSP+GRL+QV+YA EA+ +A+G+ KDGVVL EK+VTSKL++ S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+D+++ E+ LA+ Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAV 195
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.537e-42 Identity = 85/195 (43.59%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QV YA EA+ +A+G+ KDGVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I + Y+DD++ E+ LA+ +T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKT 201
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42 Identity = 85/195 (43.59%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ YKDD+S E+ LA+ +T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKT 201
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42 Identity = 85/195 (43.59%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ Y Y EP PV +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y+DD++ ++ LAL +T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPD-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAG--INDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKT 201
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.233e-41 Identity = 86/195 (44.10%), Postives = 126/195 (64.62%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QV YA EA+ +A+G+ K GVVL EK++TS+L++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y DDI + LA+ +T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILALAKT 201
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.104e-41 Identity = 85/195 (43.59%), Postives = 126/195 (64.62%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QV YA EA+ +A+G+ K+GVVL EK++TSKL++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y W+ +I + Y DD+ + LA+ +T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKT 201
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41 Identity = 85/189 (44.97%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 YD T+FSP+GRL+QVEYA EA+ +AIGI K+GV+L+ +K+V SKLL+ T EK+YKID+H+ A +G+++DA +LI+ AR++AQ Y EP+ V++L + +CD KQ YTQ+GG+RPFGVS L AG D+ +LY +DPSG +K +++Y+DD+S ++ L L Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVP--KLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGL 193
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.781e-40 Identity = 83/190 (43.68%), Postives = 126/190 (66.32%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 YD T+FSP+GRL+QVEYA EA+ +A+GI ++GVVL +K+VTSKL++ S EK+Y+ID H+ A AG+++DA +L+ AR++AQ Y Y Y EP+ V+ LV+++CD KQ YTQ GG+RPFG + L AG D G +L+ +DPSG K + +++Y++D++ E+ LA++ Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPE-SIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVR 197
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40 Identity = 90/196 (45.92%), Postives = 122/196 (62.24%), Query Frame = 3 Query: 111 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 P YD TIFSPEG++YQVEYA EA+ +G+ K GVVL EK+ S L +S S EK+Y ID+HVA + +G+++DA ILI+ AR A + + Y EP+ VE L +++C+ KQ YTQFGG RPFGV+ L AG D+ +G +LY +DPSG Y G+ L+++YK D+ GE LALK Sbjct: 3 PPAMAGYDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSS-SLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDR-HGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALK 196 The following BLAST results are available for this feature:
BLAST of FC930447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930447 ID=FC930447; Name=FC930447; organism=Citrus clementina; type=EST; length=714bpback to top |