FC930447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35 Identity = 75/195 (38.46%), Postives = 125/195 (64.10%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD T+FSP+GRL+QVEYA EA+ +A+G+ +GV+L+ +KKV S+L++ + S EK+ IDD+VA +G+++DA +L++ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+++ E+ +L +K + + Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQN-SIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSS 200
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 78/193 (40.41%), Postives = 115/193 (59.59%), Query Frame = 3 Query: 120 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 S RYD T+FSP+G L+QVEYAMEA+ A+G+ KD +VL EKK T+KL Q + S K+ K+DDH+ AG+ +D+ +LI+ A ++ Q Y ++ VE + + + +Q YTQ GG+RPFG+S L G+D + LY +DPSG+Y WK L+++Y D+S ES LA++ Sbjct: 3 SARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKL-QDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNY-TDVSEEESIKLAVR 193
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35 Identity = 78/192 (40.62%), Postives = 115/192 (59.90%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK+ S E+ LA++ Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKL-QDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-SGQETIKLAIR 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 74/195 (37.95%), Postives = 118/195 (60.51%), Query Frame = 3 Query: 129 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALKGAQQT 713 YD TIFSP+G LYQV+YA EA+ + +G+ +K GVVL+GEK+ ++LL S EK++ +DDHV C+ AG+ SD ILI+ AR QA ++ Y EP+ ++ L + + D KQ YTQ GG+RPFGV+ + G D+ +L M++PSG + + +++Y++D++ ++ L ++ T Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVD-SIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALAST 203
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 79/195 (40.51%), Postives = 118/195 (60.51%), Query Frame = 3 Query: 111 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 P + YD T+FSP+GRL+QVEYA EA+ ++IGI +G+VL +K+ TS L++ +TS EK++KID+H+ A +G+++DA L+ ARV+AQ Y EP+ V+ L + LCD Q YTQ GG+RPFG + + G +L+ +DPSG +K I + YKDD++ E+ +LAL Sbjct: 3 PLQNAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVE-ATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGI-CKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLAL 195
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 77/193 (39.90%), Postives = 113/193 (58.55%), Query Frame = 3 Query: 117 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLAL 695 M+ RYD T+FSP+G L+QVEYA EA+ +A+GI KD VVL EKK +KL Q + K+ +D+HV A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ ++ ++ L Sbjct: 1 MAARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKL-QEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKL 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.843e-35 Identity = 77/192 (40.10%), Postives = 115/192 (59.90%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK+ + E+ LA++ Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKL-QDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQ-ETVKLAIR 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35 Identity = 79/196 (40.31%), Postives = 116/196 (59.18%), Query Frame = 3 Query: 111 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 P+ YD T+FSP+GRLYQVEYA EA+ +A+GI +GVVL+ +K+VTS+LL+ S EK++KID H+ A +G++ DA L++ ARV++Q +Y EP+ VE L + LCD Q YTQFGG RP+G + L AG +L+ +DPSG +K + +Y++D + L +K Sbjct: 3 PQYQMGYDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEP-VSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDGEA-RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIK 196
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.460e-34 Identity = 80/192 (41.67%), Postives = 114/192 (59.38%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK-NYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK D S E+ LA++ Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-DTSGKETIKLAIR 192
BLAST of FC930447 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.460e-34 Identity = 80/192 (41.67%), Postives = 114/192 (59.38%), Query Frame = 3 Query: 126 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK-NYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISRGESSSLALK 698 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK D S E+ LA++ Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-DTSGKETIKLAIR 192 The following BLAST results are available for this feature:
BLAST of FC930447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930447 ID=FC930447; Name=FC930447; organism=Citrus clementina; type=EST; length=714bpback to top |