FC930448

Overview
NameFC930448
Unique NameFC930448
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length765
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_STAHJ (Phosphoadenosine phosphosulfate reductase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 2
Query:  281 EKVEGEEDFEQLAKELENASPLEIMDRALEKFGNDIAIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            E  EG+   + ++ +       EI++ A   +G+ I  + S GAE + LI+  +      ++  LDT     ETY   D V++HF  +RIE   PD  +E QA   +  L   +++   +CC +RK++PL     G  AW++G R+DQSP TR+    +  D
Sbjct:    9 ENFEGDPFIDSISTDDATKGAYEILEWAYRTYGDSIVYSCSFGAESMVLIDLIYQIKPDAQIVFLDTDLHFQETYDLIDRVKEHFPKLRIEMKKPDLTLEEQADKYNPAL---WKNNPNQCCYIRKIKPLEEVLGGAVAWVSGLRRDQSP-TRANTNFINKD 166          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_RHIME (Phosphoadenosine phosphosulfate reductase OS=Rhizobium meliloti GN=cysH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.146e-13
Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 2
Query:  404 GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            G ED  +            V +L TGRL  ET    D+ E+ + I I+  +P+  ++ A V   G+  FYE  +    CC VRK++PL RA  G   WITG R+ QS G R+  P  + D
Sbjct:   57 GIEDQVITAAIGSNRLDIEVATLKTGRLFNETVALIDQTEETYDILIKRYYPEKADIDAYVAQYGMNGFYESVEARHACCGVRKLKPLARALDGASYWITGLRRGQS-GNRATTPFAEAD 175          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_MYCA9 (Phosphoadenosine phosphosulfate reductase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=cysH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12
Identity = 53/151 (35.10%), Postives = 78/151 (51.66%), Query Frame = 2
Query:  308 EQLAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            E+ A EL++AS  E++    E FG +  +A S  +D  L++ A        V  LDTG    ET    D VE  + I +  + P+  V  Q  +  K LF+       ECCR+RKV PLR++  G  AW+TG R+  +P TR+  P++  D
Sbjct:   18 ERGAAELQDASAEELLRWTDENFGGNYVVA-SNMQDAVLVDLAAQVRPGVDVLFLDTGYHFAETIGTRDAVESVYDIHVVNVAPEQTVAQQDELVGKDLFA---SDPGECCRLRKVVPLRKSLAGYAAWVTGLRRVDAP-TRANAPLISFD 163          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_GLOVI (Phosphoadenosine phosphosulfate reductase OS=Gloeobacter violaceus GN=cysH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  308 EQLAKELENASPLEIMDRALEKFGNDIAIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPDAVEVQALVRSKGLFS--FYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            E LA++ E+ +P  I+  A+  FG+ + +A + G E + L++         + F L+TG   PET    D V   F  +++E + P    + ++ +   ++    ++     CC +RKV PL RA    +AWI G R++QSP TR +I VVQ D
Sbjct:   18 EHLARQWEDLAPEAILAEAVRCFGDKLVLASAFGPESIILLDMLVKVWPRPQAFFLETGFHFPETLALKDRVLARFPQLQLEVVGP----LMSVAQQNAIYGERLHDRNPDHCCAIRKVEPLNRALAPYKAWIAGMRREQSP-TRGQIGVVQWD 166          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_GEOSW (Phosphoadenosine phosphosulfate reductase OS=Geobacillus sp. (strain WCH70) GN=cysH PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 2
Query:  329 ENASPLEIMDRALEKFGNDIAIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEV-EKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            E    L+++  A  ++ +DI  A S G E + LI+          +  LDTG    ETY+  ++V EK+  +RI    P  ++E QA      L   ++    +CC +RKV PLR A  G+ AWI+G R++QSP TRS +  +  D
Sbjct:   20 ETKGALDVLTWAFRQYKDDIVYACSFGVEGIVLIDLISQVKPDAEIVFLDTGLHFRETYKTIEKVKEKYPSLRIVMKKPSLSLEEQAQQLGDEL---WKHNPNKCCELRKVIPLREALTGITAWISGLRREQSP-TRSHVEYINKD 161          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH2_BACSU (Probable phosphoadenosine phosphosulfate reductase OS=Bacillus subtilis GN=yitB PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11
Identity = 45/154 (29.22%), Postives = 79/154 (51.30%), Query Frame = 2
Query:  308 EQLAKELENA--SPLEIMDRALEKFGNDIAIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            + L+K++ +     L+++  A   +G  I  A S GAE + L++      +   +  LDTG    ETY   + V++ + G  I+ + P+    +   +  G    ++     CC++RK+ PL++   G+ AWI+G R+DQSP TR  I  V +D
Sbjct:   12 DMLSKQITDQLIDELDVLKWAYRTYGEKIVYACSFGAEGMVLLDLISKINKNAHIIFLDTGLHFQETYELIETVKERYPGFAIQMLEPELSLTEQGTKYGG--ELWKHNPNLCCQLRKIEPLKKHLSGMTAWISGLRRDQSP-TRKHIQYVNLD 162          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_STRCO (Phosphoadenosine phosphosulfate reductase OS=Streptomyces coelicolor GN=cysH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11
Identity = 56/155 (36.13%), Postives = 74/155 (47.74%), Query Frame = 2
Query:  308 EQLAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFR---VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFP--DAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQVD 757
            E+  +ELE+A+ LEI+  A E FG+   +  S  ED  +   AHL  R      V  LDTG   PET    D VE    + +  + P     E  A    K     ++     CC +RKV+PL     G RAW TG R+D+S  TR+  PVV  D
Sbjct:   18 ERAGRELEDATALEILRWAAETFGDRFCVT-SSMEDAVV---AHLASRALPGVDVVFLDTGYHFPETIGTRDAVEAVMDVNVITLTPRQTVAEQDAEYGPK----LHDRDPDLCCALRKVKPLEEGLAGYRAWATGLRRDESE-TRANTPVVGWD 163          
BLAST of FC930448 vs. ExPASy Swiss-Prot
Match: CYSH_RHILO (Phosphoadenosine phosphosulfate reductase OS=Rhizobium loti GN=cysH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 50/140 (35.71%), Postives = 72/140 (51.43%), Query Frame = 2
Query:  341 PLEIMDR-ALEKFGNDIAIAFS-GAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRAPQGLRAWITGQRKDQSPGTRSEIPVVQ 751
            PLEI++R A E F ++IA   S GA+   L+       R   V  LDTG+   ET  + D +   FG+  I+ + P   E  AL R     + ++     CC VRKV PL R     RAW TG+++ Q+  TR+ +PV +
Sbjct:   34 PLEIIERSARELFHDEIAAVSSFGADSAVLLHMIAEIDRTLPVIFLDTGKHFEETLGYRDALVADFGLTNIQVIKP---EEAALARIDPTGNLHQSNTDACCDVRKVEPLARGVAPFRAWFTGRKRFQA-STRAALPVFE 169          
The following BLAST results are available for this feature:
BLAST of FC930448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CYSH_STAHJ4.706e-1331.48Phosphoadenosine phosphosulfate reductase OS=Staph... [more]
CYSH_RHIME6.146e-1335.83Phosphoadenosine phosphosulfate reductase OS=Rhizo... [more]
CYSH_MYCA91.788e-1235.10Phosphoadenosine phosphosulfate reductase OS=Mycob... [more]
CYSH_GLOVI3.984e-1231.82Phosphoadenosine phosphosulfate reductase OS=Gloeo... [more]
CYSH_GEOSW1.977e-1134.25Phosphoadenosine phosphosulfate reductase OS=Geoba... [more]
CYSH2_BACSU1.977e-1129.22Probable phosphoadenosine phosphosulfate reductase... [more]
CYSH_STRCO2.582e-1136.13Phosphoadenosine phosphosulfate reductase OS=Strep... [more]
CYSH_RHILO7.513e-1135.71Phosphoadenosine phosphosulfate reductase OS=Rhizo... [more]

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Properties
Property NameValue
Genbank descriptionC34007F09EF PostHarvC1 Citrus clementina cDNA clone C34007F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930448 ID=FC930448; Name=FC930448; organism=Citrus clementina; type=EST; length=765bp
GCTCCCACACAAACACAAACACAAACACAAAACTTCAATAATCATGGCCC
TGGCTGTAACTTCTTCAAATTCAATTTCAAGCTCCAGTTTTGCTCTTTCT
AGTTCTTCAAATGACATTAAAGTTTCACAAATCGGTTCTTTCCGGTTAGT
GGACCGGGCAAACGTGGCTTCCACGAGCCTCTCTCAACGACGTAGTTTAG
TAAGACCGTTGAATGCCGAGCCAAAACGAAACGATTCCGTGGTGCCTCTG
GCAGCAACTCTCGCTACCCCTGAAGTGGCGGAGAAAGTAGAAGGGGAGGA
GGATTTTGAGCAATTGGCTAAGGAGCTTGAAAATGCGTCACCTCTTGAAA
TCATGGATAGAGCTCTTGAAAAGTTTGGAAATGACATAGCGATTGCTTTC
AGTGGTGCTGAAGATGTTGCTTTGATCGAGTATGCCCATTTAACTGGTAG
ACCATTTCGGGTGTTTAGCCTGGATACTGGAAGGCTAAACCCAGAAACAT
ATAGATTCTTTGATGAAGTTGAGAAACATTTTGGCATACGTATTGAATAC
ATGTTTCCCGATGCTGTTGAAGTTCAGGCATTAGTGAGGAGCAAGGGGCT
CTTCTCTTTCTATGAGGATGGGCACCAGGAGTGCTGCCGTGTGAGGAAAG
TGAGGCCCCTTCGGAGGGCCCCTCAGGGATTGCGTGCCTGGATCACTGGC
CAAAGGAAAGATCAGTCTCCAGGTACTAGGTCTGAAATCCCTGTAGTCCA
GGTGGATCCAGTTTT
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