FC930451

Overview
NameFC930451
Unique NameFC930451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 52/151 (34.44%), Postives = 75/151 (49.67%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDHE 708
            + L+K  +SK Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ +     L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE 173          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDHECD 714
            + L+K  + K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ ++    L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D
Sbjct:   27 WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 176          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1
Query:  535 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD---HECD 714
            P   DWR+ GAVT VK+Q  CGSCW+FS    +EG + + TG+L+SLSEQ+L+DC+   H CD
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYRSHGCD 64          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  262 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-----LPTDFDWRD-HGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            L  +  F+LF+ +++++Y+  EE+  R  +F  NL +A++ +  D  TA  GVT FSDLT  EF R    L    R+  +A K      ++     +P   DWR   G ++ VK Q +C  CW+ +A G +E    +   + V LS Q+L+DC
Sbjct:   36 LELKQAFTLFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEEEDLGTAEFGVTPFSDLTEEEFGR----LYGHRRMDGEAPKVGREVGSEEWGESVPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC 184          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  262 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTN-----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            L+ +  +  +K K+ K Y+ +EE   R  V++ N+++     +   L   T    +  F+D+T  EF+   +G      N   RL   A  +   P +      LP   DWR+ G VT V+ QG C SCW+F  TGA+EG     TG+L+ LS Q L+DC
Sbjct:   23 LSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGS-FFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDC 180          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.317e-14
Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 1
Query:  277 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGL---------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDHECD 714
            H+ L+K    K Y  + +   R  +++ NL+      L     VH     +    D+T  E  ++  GL         N  L +P    +AP           D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D
Sbjct:   25 HWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAP--------DSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 175          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  247 SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            S + +L+ +  + L+K    K Y ++ +   R  +++ NL++     L     VH     +    D+T  E  ++  GL      P+ +     L T +    +P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC
Sbjct:   17 SPEEMLDTQ--WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP---PSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC 170          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDHECD 714
            + L+K  + K Y ++ +   R  +++ NL+      L     VH     +    D+T  E  ++  GL      P+ ++    L   D     P   D+R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP---PSHSRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND 176          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14
Identity = 51/153 (33.33%), Postives = 74/153 (48.37%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC--DHEC 711
            F  FK  F+K YAT EE +   + F  +L+  +  +         +   SDL+  EF+ ++L        L  +  L A+     I   N +P++ D R    VT ++ QG CGSCW+FS   A E A+L      + LSEQ+LVDC   H C
Sbjct:   26 FEEFKKAFNKNYATVEEEEVARKNFLESLKYVEANK-------GAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVN-VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCASQHGC 170          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  532 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD---HECD 714
            LP+  DWR  GAV  +K+Q  CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD   H C+
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCN 64          
The following BLAST results are available for this feature:
BLAST of FC930451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CATK_RABIT1.774e-1434.44Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_PIG1.774e-1433.99Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
MEX1_JACME2.317e-1453.97Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATW_FELCA2.317e-1433.33Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATQ_RAT2.317e-1433.13Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_HUMAN2.317e-1433.96Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATK_MOUSE3.026e-1432.70Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_CANFA3.026e-1433.99Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
PEPT1_DERFA3.952e-1433.33Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
ERVB_TABDI3.952e-1454.69Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC34007F12EF PostHarvC1 Citrus clementina cDNA clone C34007F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930451 ID=FC930451; Name=FC930451; organism=Citrus clementina; type=EST; length=732bp
GAATGAGGAGAAATTAGGTGTCGAAATCTCATAAGCGGACCCAACCACAA
GTTTCTTCTGTCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCG
CAGTCCACTGAAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTC
CTCCTCCTCCTCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGG
CGACGATGCTATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCG
AAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAA
TTCTCCAAGACTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGT
GTTCAAGGCTAACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCA
CTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCCGAATTC
CGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGC
TCAAAAGGCTCCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACT
GGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGA
TCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACCTCTT
ATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTG
ATCACGAGTGTGATCCAGAAGAATCTGGTTCA
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