FC930451

Overview
NameFC930451
Unique NameFC930451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23
Identity = 63/153 (41.18%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDHECDPEES 726
            F+ +  KF++ Y++ E  + R+ +FK+N+          D   V G+  F+D+T  E+R+ +LG               +L   DL   P   DWR   AVT +KDQG CGSCWSFS TG+ EGAH L T +LVSLSEQ LVDC     PEE+
Sbjct:   36 FTEWTLKFNRQYSSSEFSN-RYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCS---GPEEN 184          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23
Identity = 67/163 (41.10%), Postives = 89/163 (54.60%), Query Frame = 1
Query:  232 SDG----EQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            SDG    E+S   +L    H   F+ F  ++ K Y   EE   RF +FK NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC
Sbjct:   36 SDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCS--ATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC 196          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 59/142 (41.55%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD 702
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR ++           +  + P+ +     P   DWR  GAVT VKDQG CGSCW+FSA G +E    L+   L +LSEQ LV CD
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD 179          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 1
Query:  268 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT---DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDH 705
            A  H+  FK +  K +    E  +RF  FK N++ A      +P A + V+ KF+DLTP EF + +L  +   R   D  K  +   +  P+     DWRD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ LV CD+
Sbjct:   38 ASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKD-HKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDN 186          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23
Identity = 54/149 (36.24%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  259 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD 702
            +L A ++F  F  KF+K+Y+++ E   RF++F+ NL     +   D TA + + KF+DL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   + ++LSEQQL+DCD
Sbjct:   21 VLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCD 169          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 1
Query:  268 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            A + F  +K++++K Y++Q+EHD RF  FKA  +        + +   G+  ++DL+  EF         R  +              +P+  DWR+   VT VKDQG CGSCW+F +TG+LEG + ++ GELVSLSEQQLVDC
Sbjct:  221 ASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC 364          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 66/148 (44.59%), Postives = 83/148 (56.08%), Query Frame = 1
Query:  289 FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            FK +  K Y  + E  +R ++F  N  + AK  Q      V     V K++DL   EFR+   G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+FS+TGALEG H   +G LVSLSEQ LVDC
Sbjct:   62 FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDC 209          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 60/154 (38.96%), Postives = 88/154 (57.14%), Query Frame = 1
Query:  256 HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD 702
            +L  A  +F  F   ++K Y +  E + R+ +FK NL    AK     D PTA + + KFSDL+ SE   +F GL+   R+ ++  K  IL  P +  P  FDWR+   VT +K+QGACG+CW+F+   ++E    +    L+ LSEQQL+DCD
Sbjct:   48 NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERV-SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD 200          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.038e-22
Identity = 53/146 (36.30%), Postives = 89/146 (60.96%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            F  + +++ + Y   +E   RF++FK N++  +     +  +   G+ +F+D+T SEF  Q+ G++    LP + ++ P++  +D+     P   DWRD+GAV  VK+Q  CGSCWSF+A   +EG + + TG LVSLSEQ+++DC
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVS----LPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC 178          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.355e-22
Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = 1
Query:  268 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT---DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDH 705
            A  H+  FK +  K +    E  +RF  FK N++ A      +P A + V+ KF+DLTP EF + +L  +   R   +  K  +   +  P+     DWRD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ LV CD+
Sbjct:   38 ASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKN-HKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCDN 186          
The following BLAST results are available for this feature:
BLAST of FC930451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CYSP2_DICDI2.731e-2341.18Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
ALEU_ARATH2.731e-2341.10Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP_TRYCR3.567e-2341.55Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP1_LEIPI3.567e-2342.00Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVCF3.567e-2336.24Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CFAD_DICDI6.084e-2338.89Counting factor associated protein D OS=Dictyostel... [more]
CATL_DROME6.084e-2344.59Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATV_NPVLD1.038e-2238.96Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
BROM1_ANACO1.038e-2236.30Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
LMCPA_LEIME1.355e-2241.33Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]

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Properties
Property NameValue
Genbank descriptionC34007F12EF PostHarvC1 Citrus clementina cDNA clone C34007F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930451 ID=FC930451; Name=FC930451; organism=Citrus clementina; type=EST; length=732bp
GAATGAGGAGAAATTAGGTGTCGAAATCTCATAAGCGGACCCAACCACAA
GTTTCTTCTGTCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCG
CAGTCCACTGAAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTC
CTCCTCCTCCTCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGG
CGACGATGCTATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCG
AAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAA
TTCTCCAAGACTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGT
GTTCAAGGCTAACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCA
CTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCCGAATTC
CGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGC
TCAAAAGGCTCCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACT
GGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGA
TCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACCTCTT
ATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTG
ATCACGAGTGTGATCCAGAAGAATCTGGTTCA
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