FC930451

Overview
NameFC930451
Unique NameFC930451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.269e-20
Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  319 TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTG--ELVSLSEQQLVDC 699
            + EE + RF +FKAN+             V G+  F+D+T  E+R  +LG       P DA    + P+  +         DWR  GAVT +K+QG CG CWSFSATGA EGA  ++ G  +L S+SEQQL+DC
Sbjct:   42 SSEEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGT------PFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDC 169          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 58/133 (43.61%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  325 EEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGL---NRRLRLPADAQKAPILPTN--DLPT-DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD 702
            +E + RF VFK N++      Q  D      + KF D+T  EFR ++ G    + R +          +  N   LP    DWR  GAVTGVKDQG CGSCW+FS   ++EG + + TGELVSLSEQ+LVDCD
Sbjct:   54 DEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD 186          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 60/153 (39.22%), Postives = 82/153 (53.59%), Query Frame = 1
Query:  253 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            D  LNA+ +   +K+   + Y   EE  +R  V++ N++  +          HG T     F D+T  EFR+   G   +        + P+    ++P   DWR+ G VT VK+QG CGSCW+FSATGALEG     TG+LVSLSEQ LVDC
Sbjct:   22 DQSLNAQWY--QWKATHRRLYGMNEE-GWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFA--EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC 169          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.164e-20
Identity = 55/143 (38.46%), Postives = 89/143 (62.24%), Query Frame = 1
Query:  277 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHG-AVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            HF+ +  +  KTY+++E + +R +VF  N R+ +     + T   G+ +FSD++ +E + ++L    +      A K+  L  T   P+  DWR  G  V+ VK+QGACGSCW+FS TGALE A  +++G++++L+EQQLVDC
Sbjct:   32 HFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQ---NCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDC 170          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  262 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTG---ELVSLSEQQLVDC 699
            L   + F+ +     +TY++ EE + R+++FK+N+    +        V G+  F+D+T  E+R  +LG           ++  I  T   PT  DWR  GAVT +K+QG CG CWSFS TG+ EGAH +++G   +LVSLSEQ L+DC
Sbjct:   24 LQYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEEKIFST-PAPT-VDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDC 169          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20
Identity = 55/155 (35.48%), Postives = 77/155 (49.68%), Query Frame = 1
Query:  265 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---------PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD 702
            +A  ++  F  + +K Y T ++ D  F  FK NL        +   AV+G+ KFSD+    F  +  GL   L    D+   P           P+   P  FDWR    VT VK+QG CGSCW+F+A G +E  + +    L+ LSEQQL+DCD
Sbjct:   28 SASVYYENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCD 182          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20
Identity = 51/149 (34.23%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  259 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCD 702
            +L A ++F  F  +++K Y ++ E   R+++F+ NL     +   D TAV+ + KFSDL+  E   ++ GL+  L      +   +  P    P +FDWR    +T VK+QG CG+CW+F+   +LE    ++   L++LSEQQ++DCD
Sbjct:   21 ILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD 168          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  319 TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGE--LVSLSEQQLVDC 699
            + EE + R+ +FKAN+             V G+  F+D++  E+R  +LG       P DA    +  ++   D     DWR  GAVT +K+QG CG CWSFS TGA EGA  L+ G+  LVSLSEQ L+DC
Sbjct:   42 SSEEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGT------PFDASSLEMTESDKIFDASAQVDWRTQGAVTPIKNQGQCGGCWSFSTTGATEGAQYLANGKKNLVSLSEQNLIDC 167          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 57/149 (38.26%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  280 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR------LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDCDHE 708
            F  +  K  K Y +  E + R  +F+ NLR    R   + +   G+T F+DL+  E++    G + R          +D  K      + LP   DWR+ GAVT VKDQG C SCW+FS  GA+EG + + TGELV+LSEQ L++C+ E
Sbjct:   49 FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSA--DDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE 195          
BLAST of FC930451 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.820e-20
Identity = 59/153 (38.56%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  253 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHLLSTGELVSLSEQQLVDC 699
            DH L A+  ++ +K+  ++ Y   EE  +R  V++ N++  +          H  T     F D+T  EFR+   G   R        + P+    + P   DWR+ G VT VK+QG CGSCW+FSATGALEG     TG L+SLSEQ LVDC
Sbjct:   22 DHSLEAQ--WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDC 169          
The following BLAST results are available for this feature:
BLAST of FC930451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
CYSP6_DICDI1.269e-2041.04Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSP_HEMSP2.164e-2043.61Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATL1_CANFA2.164e-2039.22Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATH_RAT2.164e-2038.46Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CYSP4_DICDI3.691e-2038.26Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATV_NPVST3.691e-2035.48Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVEP3.691e-2034.23Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CYSP7_DICDI4.820e-2040.91Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CPR3_ARATH4.820e-2038.26Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATL1_HUMAN4.820e-2038.56Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34007F12EF PostHarvC1 Citrus clementina cDNA clone C34007F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930451 ID=FC930451; Name=FC930451; organism=Citrus clementina; type=EST; length=732bp
GAATGAGGAGAAATTAGGTGTCGAAATCTCATAAGCGGACCCAACCACAA
GTTTCTTCTGTCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCG
CAGTCCACTGAAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTC
CTCCTCCTCCTCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGG
CGACGATGCTATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCG
AAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAA
TTCTCCAAGACTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGT
GTTCAAGGCTAACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCA
CTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCCGAATTC
CGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGC
TCAAAAGGCTCCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACT
GGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGA
TCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACCTCTT
ATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTG
ATCACGAGTGTGATCCAGAAGAATCTGGTTCA
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