FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 62/196 (31.63%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGD-LFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDL--VEQAGKLDPVIGRDEENRKGVRI 710 NP++FT K AIA +LA A H HL +LL + G+ Q AG + Q + ++ + + P + P + +L K++ RA+ A+K GD ++++ L+L +D + G LF++ G++ ++ ++++RG + KV + + + AL+ YGRDL + + GKLDPVIGRD+E R+ ++I Sbjct: 5 NPNQFTEKAWAAIARTPDLAKQAQHQNLESEHLMKSLL-EQEGLATQIFQKAGC--SVQRIRDLTDEFISRQP-KISHPSGVYLGQSLDKLLDRAEEARKQFGDEFISIEHLVLAFAQDDRFGKKLFQDIGLSEKVLREAIQQIRGSQ--KVTDQNPEGKYAALEKYGRDLTLLARQGKLDPVIGRDDEIRRVIQI 194
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN +KFT K EA+ A LA + +A P+HL AL+ G A N + E + NQ LP T + AS LI+++ + + D+ ++ + +L L+D +G LFK G+ V + ++RG G V + + + T QAL+ Y DL E+A GKLDPVIGRDEE R+ V++ Sbjct: 1 MNFEKFTTKLQEALNEAQSLAVAKDNAYIEPVHLLYALVKQQDGAIAPLFTTLNVSTQTLINELELILNQ----LPQVTGTTTQ--ASQQLIRLLNQTAKLAQQFNDSFISSELFLLAALDDHGSLGKLFKAFGLTKENVTQAISQMRG--GESVNNQNAEQTRQALQKYTIDLTERAKTGKLDPVIGRDEEIRRTVQV 191
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19 Identity = 65/198 (32.83%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAG--GENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN +++T + +AIA + LA + H++ HLA +L D +G+ A+ + AG +N Q+A+ + +LP + S+ L + RA+ D +A+D L+L L E G+ + V+ ++++RG GR V S + T+ AL+ YG DL QA GKLDPVIGRDEE R+ ++I Sbjct: 1 MNLERYTEQARQAIAQSQVLARESAHSKIDLPHLAAVMLRDAAGLPAKIVQKAGQNPQNIYQAAQ----SELGRLPKVSGTEGGQYLSSRLASALGRAEKLADELKDRFVALDTLLLALAETGY-------GGLQASAVRQALQEIRG--GRTVNSEHAEGTYNALEQYGLDLTRQAEEGKLDPVIGRDEEIRRVIQI 185
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB2_STRAW (Chaperone protein clpB 2 OS=Streptomyces avermitilis GN=clpB2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19 Identity = 64/202 (31.68%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQT---PAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ---IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M+ ++ T K+ EA+ A A GH + HL +ALL G+ + + AG E + + + P T AP ++ + L +++ A+ K D +++V+ L+L L E+S G L K+AG+ S + ++RG + +V SA+ + ++AL+ YGRDLV +A G+LDPVIGRD E R+ +I Sbjct: 1 MDMNRLTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLQQAGTE--PKELRAAVREELSHRPKATGPGAAPGQVFVTQRLARLLDAAEREAKRLKDEYVSVEHLLLALAEESSSTAAGLLLKQAGITRDSFLSALTQVRGNQ--RVTSANPEVAYEALEKYGRDLVLEARSGRLDPVIGRDAEIRRVTQI 198
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_WOLSU (Chaperone protein clpB OS=Wolinella succinogenes GN=clpB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 66/194 (34.02%), Postives = 103/194 (53.09%), Query Frame = 3 Query: 138 DKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLP-SQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +K TH+ E + A LA A + + H+A ALL + + I QA+N G + +A E + +LP S + + I S L + +A+A GD +AVD +L L++ + LF + + V +K +E +RG G K+ESA+ D ++L YG DL ++A KLDPVIGRDEE + ++I Sbjct: 5 EKMTHQLRETLEQALSLALHAKNPEVDLPHMAWALLINSTSILNQALNKMGVDKSALELEA--KSLVDRLPQSSSLTKENIKISKRLADSLTQAEALGVKGGDKFIAVDTWLLANLKEEPLKSLFSKY-LDVNELKKNLESIRG--GAKIESATDDENLESLAKYGIDLTQKALENKLDPVIGRDEEISRMMQI 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18 Identity = 62/197 (31.47%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T + +A+A A LA H P+H+ ALL D SG + + + G N E + +A+ LP + + L +++ + + HGD +A + +L +D S +G + AG ++++ ++KLRG G V+S + + QAL+ Y DL +A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALL-DQSGGSTRPLLSQSGVNVPALRERL-GEALDTLPKVSGQEGNLSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRG--GETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_LACPL (Chaperone protein clpB OS=Lactobacillus plantarum GN=clpB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18 Identity = 64/198 (32.32%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS--QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MNP++FT +A+ A ++A + H + HL L+ P + Q + AG + E + S S++L +++ A A +KA GD +LA D L L L++ + Q+ + G+ +VK+ V+++RG G++V S + + +QAL+ YG DLV+QA G DPVIGRDEE +RI Sbjct: 1 MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHL-FKFLTQPGELVRQIFSEAGADLDQLQTELDRELDDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYLATDTLALALMDQTGDQLTKYLNQQGITAGQVKNAVDRIRG--GQRVTSRNQEDQYQALEKYGVDLVKQARQGNQDPVIGRDEEILDVIRI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18 Identity = 61/197 (30.96%), Postives = 99/197 (50.25%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T + A+A A LA H P+H+ ALL G + AG N E + + ++ LP + + S L ++ R + HGD +A + +L +++DS +G + AG ++++ ++KLRG G V++ + + QAL+ Y DL +A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRMDKLTSRFQNALADAQSLAVGRDHTIIEPVHVFSALLDQQGGSTRPLLMQAG-VNVPLLRERL-TEILEALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQFMASEWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRG--GETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18 Identity = 62/197 (31.47%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T + +A+A A LA H P+H+ ALL D SG + + + G N E + +A+ LP + + L +++ + + HGD +A + +L +D S +G + AG ++++ ++KLRG G V+S + + QAL+ Y DL +A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALL-DQSGGSTRPLLSQAGVNVPLLRERL-GEALDTLPKVSGQEGNLSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRG--GETVQSENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_SHEON (Chaperone protein clpB OS=Shewanella oneidensis GN=clpB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18 Identity = 60/197 (30.46%), Postives = 102/197 (51.78%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+ T+K AI+ A LA H PLHL +ALL+ SG + AG +A + +Q +++LP ++ S LI+++ + D +++ + +L LE + K++G ++ +E++RG G+KV+ + + QALK + DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRLDRMTNKFQLAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHPLLTQAGIRVSA--LRSLLSQELERLPQVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFVLAALEGCDALAQCLKKSGATKELMEQTIEQVRG--GQKVDDPNAEDQRQALKKFTVDLTERAEQGKLDPVIGRDDEIRRTIQV 193 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |