FC930453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_MYCTU (Chaperone protein clpB OS=Mycobacterium tuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T KT A+ A + A++AG+ + P HL +ALL+ GI A + G E A AE + + +LP T A + S + I AQ D +++ + +++GL DS + L G + ++ K+RG +V S + T+QAL+ Y DL +A GKLDPVIGRD E R+ V++ Sbjct: 7 TTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAET--QRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVKVRG--SARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_MYCBO (Chaperone protein clpB OS=Mycobacterium bovis GN=clpB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T KT A+ A + A++AG+ + P HL +ALL+ GI A + G E A AE + + +LP T A + S + I AQ D +++ + +++GL DS + L G + ++ K+RG +V S + T+QAL+ Y DL +A GKLDPVIGRD E R+ V++ Sbjct: 7 TTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAET--QRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVKVRG--SARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB1_ANASP (Chaperone protein clpB 1 OS=Anabaena sp. (strain PCC 7120) GN=clpB1 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 56/197 (28.43%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGEN-AAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 +P+KFT K E I + ++ + Q HL +AL+ DP+ + + + A + Q F Q K+ D++ +L ++ RA+ ++ D +++V+ ++L ++D ++G + K V A++++ ++ +RG + KV + ++ ++AL+ +GRDL EQA GKLDPVIGRD+E R+ +++ Sbjct: 5 DPNKFTDKAWEVIVKSQDIVRAYQQQQLDVEHLILALIEDPTSLAVRILGRAEIDPIRLQQQLEAFTQRQTKVGKS----DQLYLGRSLDVMLDRAEEIRERMKDGYISVEHMLLAFVDDERVGRKVLKGFNVDSAKIEASIKAVRGSQ--KVTDQNPESRYEALQKFGRDLTEQAKSGKLDPVIGRDDEIRRVIQV 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_TREPA (Chaperone protein clpB OS=Treponema pallidum GN=clpB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18 Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 MN D++T K +EA+ A LA + H Q HL ALLS GI + I G + E + Q +++ P T + + TL K RA+ + D +++ + L+L + E DS L G+ + + ++ +RG ++V S ++TFQ L+ Y RDL A K+DPVIGRDEE R+ +++ Sbjct: 1 MNTDRYTVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLIEKIGAKPDFLYDELL--QCLRRKPRVTGPAAQTRCAPTLSKACARAERLALKNQDEYVSCEHLLLAISETDSNTARLLHSQGITSKTISAALKDIRG--SKRVTSQDPESTFQCLEKYCRDLTTLAREEKIDPVIGRDEEIRRVMQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPA (Chaperone protein clpB OS=Mycobacterium paratuberculosis GN=clpB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18 Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 3 Query: 147 THKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLE-DSQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 T KT A+ A + A++AG+ + P HL +ALL+ GI A + G E A AE + + +LP + A + S + I AQ D +++ + L++GL DS + L G + ++ K+RG +V S + T+QAL+ Y DL +A GKLDPVIGRD E R+ V++ Sbjct: 7 TTKTQAALTAALQAASAAGNPEIRPAHLLMALLTQADGIAAPLLEAVGVEPATIRAEA--ERMLARLPQASGASSQPQLSRESLAAITTAQHLATELDDEYVSTEHLMVGLATGDSDVAKLLTGHGASPQALREAFVKVRG--SARVTSPDPEATYQALEKYSTDLTARAREGKLDPVIGRDNEIRRVVQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18 Identity = 66/202 (32.67%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAIN--NAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIP---ASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQ--AGKLDPVIGRDEENRKGVRI 710 M+ ++ T KT EAI A LA S H + +HL +ALL + G+ + N E Q AE + +KK PS T + E+ ++ L +++ RA + D +++V+ ++L E+ I LF + + + +RG + +V S + + T++AL+ YGRDLV + AGK+DPVIGRD E R+ +RI Sbjct: 1 MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLEEQDGLAVRIFQKMNVDIEALKQGAESL----IKKKPSVTGSGAEVGKLYVTSALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRLHITKDNLLQSLMTVRGNQ--RVTSQNPEATYEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRI 196
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17 Identity = 60/197 (30.46%), Postives = 98/197 (49.75%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQ-IGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T + A+A A LA H P+H+ LL G + AG N E + + ++ LP + + S L ++ R + HGD +A + +L +++DS +G + AG ++++ ++KLRG G V++ + + QAL+ Y DL +A GKLDPVIGRDEE R+ +++ Sbjct: 1 MRMDKLTSRFQNALADAQSLAVGRDHTIIEPVHVFSVLLDQQGGSTRPLLVQAG-VNVPLLRERL-TEILEALPKVSGQTVNVSPSNELSRLFHRTDKLAQQHGDQFMASEWFVLAVVDDSGGLGQALRAAGAEKKKIEAAIDKLRG--GETVQTENAEEQRQALEKYTIDLTARAESGKLDPVIGRDEEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17 Identity = 61/196 (31.12%), Postives = 107/196 (54.59%), Query Frame = 3 Query: 132 NPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDSQIG-DLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 NP++FT K EAIA E+A Q HL ALL + G+ + + AG Q Q +++ P + + +L ++ RA+A +K D +++++ L+L +D + G LF+E + +++K+ ++++RG + V + + +Q+L+ YGRDL E A G+LDPVIGRD+E R+ ++I Sbjct: 5 NPNQFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALL-EQDGLASGILTKAGVN--LQKISDRTEQYIQRQPKVSGNSTSVYLGRSLDTLLDRAEAHRKDFQDEYISIEHLLLAYPKDDRFGKGLFQEFALDESKLKNIIKQVRGSQ--TVTDQNPEGKYQSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTIQI 195
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.084e-17 Identity = 58/197 (29.44%), Postives = 96/197 (48.73%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLED-SQIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M D+FT K AI+ A LA H P+HL VALL + + + + +LP + ++ S+++ + + D++++ + +L LED +G L KE G+ +V +EK+RG G+KV + + QAL+ + DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLDVD--VTHLRSKLGEMLDRLPKVSGIGGDVQLSSSMGTLFNLCDKVAQKRQDSYISSEVFLLAALEDRGPLGQLLKEVGLTEQKVSQAIEKIRG--GQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQV 193
BLAST of FC930453 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.084e-17 Identity = 65/197 (32.99%), Postives = 95/197 (48.22%), Query Frame = 3 Query: 129 MNPDKFTHKTNEAIAMAHELATSAGHAQFTPLHLAVALLSDPSGIFAQAINNAGGENAAQSAEPVFNQAMKKLPSQTPAPDEIPASTTLIKVIRRAQAAQKAHGDTHLAVDQLILGLLEDS-QIGDLFKEAGVAVARVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQA--GKLDPVIGRDEENRKGVRI 710 M DK T K +A+ A LA + + P HL +A+L D + AG A A QA+ +LP EI S L ++ A GD +A + + L +D + G L KE G A +++ ++ +RG G V SA + +ALK Y DL E+A GKLDPVIGRD+E R+ +++ Sbjct: 1 MRFDKLTTKFQQALGDAQSLAVANDNPYIEPQHLLLAMLDDAEAGVGGLLARAGVNVPALKAG--LKQAIDRLPRVQGHGGEITVSRDLANLLNIADKIAMKLGDEFIASELYLSALSQDKGEAGRLLKEHGGNHASIQAAIDAVRG--GESVNSADAEGQREALKKYTMDLTERARQGKLDPVIGRDDEIRRAIQV 193 The following BLAST results are available for this feature:
BLAST of FC930453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930453 ID=FC930453; Name=FC930453; organism=Citrus clementina; type=EST; length=712bpback to top |