FC930463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD_STAAC (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain COL) GN=sucD PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.175e-52 Identity = 104/166 (62.65%), Postives = 121/166 (72.89%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 +VF+DKNT+V+ QGITG FHT+Q ++YGTK+V GVTP KGG G+PVFN+V EAK ET A SVIYVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTKIVAGVTPGKGGQVVEGVPVFNTVEEAKNETGATVSVIYVPAPFAADSILEAADADLDMVICITEHIPVLDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLT 166
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD_STAES (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sucD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.004e-52 Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 +VF+DKNT+V+ QGITG FHT+Q ++YGT++V GVTP KGG G+PV+N+V EAK ET AN SV+YVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLT 166
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD_STAEQ (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sucD PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.004e-52 Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 +VF+DKNT+V+ QGITG FHT+Q ++YGT++V GVTP KGG G+PV+N+V EAK ET AN SV+YVP PF LD+V+CITE IP DMV+VK L + KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T Sbjct: 2 SVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGR-KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLT 166
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD_AQUAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Aquifex aeolicus GN=sucD PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.074e-49 Identity = 96/167 (57.49%), Postives = 120/167 (71.86%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVK-AALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 A+ V+K+T+V+ QGITGK G+FH +Q EYGT++V GVTP KGG E G+PVFN+V EA ET AN S+I+VP PF ++LVVCITEGIP DM+ VK L +L+GPNCPG+I PGE K+GIMPG+I K G++GIVSRSGTLTYEA +Q T Sbjct: 2 AILVNKDTKVVVQGITGKEGSFHAKQCKEYGTQVVAGVTPGKGGMEVEGIPVFNTVKEAVKETGANCSLIFVPAPFAADAIVEALDAGIELVVCITEGIPVKDMMMVKDYMLKNYPNAKLVGPNCPGVITPGEAKVGIMPGHIFKRGKIGIVSRSGTLTYEAAYQLT 168
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 2 OS=Archaeoglobus fulgidus GN=sucD2 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.243e-46 Identity = 92/166 (55.42%), Postives = 114/166 (68.67%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 A+ VD+ T+V+ QGITG G FHTE+ + YGTK+V GVTP KGGTE LG+PV++SV EA E ANASVI+VP PF + ++VCITEGIP HD +++ + T LIGPNCPGII PG+ +GIMP I KPG VGIVSRSGTLTY+ + T Sbjct: 2 AIIVDERTKVVVQGITGYQGKFHTERMLNYGTKIVAGVTPGKGGTEVLGVPVYDSVKEAVREADANASVIFVPAPFAADAVMEAADAGIKVIVCITEGIPVHDELKMYWRVKEAGAT-LIGPNCPGIISPGKTHLGIMPVQIFKPGNVGIVSRSGTLTYQIAYNLT 166
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCA_YEAST (Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=LSC1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 8.154e-46 Identity = 93/166 (56.02%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 206 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPG-ECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 + + K+T+VI QG TGK GTFH + EYGT +VGG PKK G HLG PVF SV +A ET A AS I+VPPP + L VCITEGIPQHDM+ + L Q KTRL+GPNCPGII P + +IGI P I + G++GI+SRSGTLTYEAV QTT Sbjct: 31 LLLPKDTKVIFQGFTGKQGTFHASISQEYGTNVVGGTNPKKAGQTHLGQPVFASVKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGPNCPGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTT 196
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: MTKB_METEA (Malate--CoA ligase subunit alpha OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=mtkB PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 84/167 (50.30%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNR---QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQ 694 ++ +D+ T ++ QGITG GTFH ++ I YG+ +VGGVTP KGG H G+PVFN+V EA T A S+ +V PPF L LV IT+GIP DM+RVK L R + +T ++GPNC GII PG+ +GIMPG+I+ PG+VG++SRSGTL YEA Q Sbjct: 2 SILIDEKTPILVQGITGDKGTFHAKEMIAYGSNVVGGVTPGKGGKTHCGVPVFNTVKEAVEATGATTSITFVAPPFAADAIMEAADAGLKLVCSITDGIPAQDMMRVKRYLRRYPKEKRTMVVGPNCAGIISPGKSMLGIMPGHIYLPGKVGVISRSGTLGYEAAAQ 168
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD_THETH (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Thermus thermophilus GN=sucD PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.439e-42 Identity = 88/160 (55.00%), Postives = 113/160 (70.62%), Query Frame = 2 Query: 206 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEA 685 + V++ TRV+ QGITG+ G FHT+Q ++YGTK+V GVTP KGGTE LG+PV+++V EA A + +AS+I+VP P + L+V ITEGIP DMVR + + +RLIG NCPGII E KIGIMPG++ K GRVGI+SRSGTLTYEA Sbjct: 2 ILVNRETRVLVQGITGREGQFHTKQMLDYGTKIVAGVTPGKGGTEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEI-KALGSRLIGGNCPGIISAEETKIGIMPGHVFKRGRVGIISRSGTLTYEA 160
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus fulgidus GN=sucD1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.206e-42 Identity = 84/160 (52.50%), Postives = 112/160 (70.00%), Query Frame = 2 Query: 203 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYE 682 A+ VD+NTRVI QGITG G+F ++ ++YGTK+VGGVTP KGG+E G+PV+N+V EA AET A+ S+IYVP F L LVVC+TEGIP +D + + L R+ K+ L+GPNCPG+I PG K+G++P G +G+VSRSGTLTY+ Sbjct: 5 AILVDENTRVIVQGITGFQGSFQAKRMLDYGTKVVGGVTPGKGGSEVHGIPVYNTVEEAVAETNADTSIIYVPARFATDAIFEAFDAGLRLVVCVTEGIPLYDEMLIHRKL-REVKSMLLGPNCPGVISPGRSKVGLLPDRSFTQGNLGVVSRSGTLTYQ 163
BLAST of FC930463 vs. ExPASy Swiss-Prot
Match: SUCD_METTH (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Methanobacterium thermoautotrophicum GN=sucD PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.714e-41 Identity = 89/165 (53.94%), Postives = 110/165 (66.67%), Query Frame = 2 Query: 206 VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 700 + +D++TR + QGITGK G+FHT Q +EYGT++V GVTP KGG E LG+ V+NSV E E NAS+I+VP PF LDLVV ITE IP HD +++ +R KT +IGPN PGII PG K+GIMP +I G +GIVSRSGTLTYE Q T Sbjct: 7 ILLDEDTRCLVQGITGKQGSFHTRQMLEYGTRIVAGVTPGKGGQEFLGVDVYNSVEEVTEEMDVNASIIFVPAPF-AKDAAFESIKHLDLVVIITEHIPVHDSMQIMEYASRMGKT-VIGPNTPGIITPGIGKLGIMPTHIFTEGTIGIVSRSGTLTYEFAAQLT 169 The following BLAST results are available for this feature:
BLAST of FC930463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930463 ID=FC930463; Name=FC930463; organism=Citrus clementina; type=EST; length=704bpback to top |