FC930465

Overview
NameFC930465
Unique NameFC930465
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 58/183 (31.69%), Postives = 90/183 (49.18%), Query Frame = 3
Query:   75 PWLLFSWILVVALN---YFSRGFKSGSRRLPPGPT-PYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRARTAIHIGQAAFDTTLNLIS 611
            P L+   +LV AL    +F   F    + LPP P    P+IG++  LG   H+S   L+  +GP+ SL FG V  VV S+   AK++LQ  + +F N  I         +E  + + P    WR ++K+  +    SR ++  QHLR ++   LL  +    RA  A++I +     T N+IS
Sbjct:    3 PQLVAVSVLVSALICYFFFRPYFHRYGKNLPPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAF-NCRIESTAVKKLTYESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVIS 184          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 51/191 (26.70%), Postives = 99/191 (51.83%), Query Frame = 3
Query:   54 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRARTAIHIGQAAFDTTLNLISNTIF 623
            M ++S   ++ F ++L     Y      S +++LPPGP   P IG++  L G +PH+ L  LAK +GP+M L+ G+V+ VV +S  MAKE+L+  D +F ++    A+    +    + + P    W+ +RKIC +   S++ + +   +R  ++  L+  +Q +  +   ++  +     T ++   + F
Sbjct:    1 MQLISIFLFICFLFLLRKWKKYSKN---SQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERVIWFTSSMTCRSAF 188          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 3
Query:   84 LFSWILVVALNYFSRGFKS--GSRRLPPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQ---TIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQL 482
            L S +++   +  SR   S    ++ PPGP   P+IGNLL L   +PH +L  LA  HGP+M L+ GQV  VV SS A A+E+L+++DT+F ++    + D I    +    M + P    WR LRK+C S   ++ ++
Sbjct:    2 LISAVILAVCSLISRRKPSPGSKKKRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIIL---YGSMDMSFAPYGGNWRMLRKLCMSELLNTHKV 137          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 57/187 (30.48%), Postives = 88/187 (47.06%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLL--AYVQENCRARTAIHIGQAAFDTTLNLISNTIFSIDLADPTSELRESLANNWGMME 692
            S    LPPGPT +P+IG L  LG  PH SLA +A  +GPIM LK G   TVV S+   A+  L+  D +F N+ I        ++   M +      W+ LRK+C+ H    + L+   H++  ++  +L   Y Q +      + + +       N+I   I S      TS+L  S + +  + E
Sbjct:   33 SHHHHLPPGPTGWPIIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSVPVPVVVPEMLTYAMANMIGRIILSRRPFVITSKLDSSASASASVSE 219          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 54/183 (29.51%), Postives = 100/183 (54.64%), Query Frame = 3
Query:   81 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GDKP-HKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAH--GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRARTAIHIGQAAFDTTLNLISNT 617
            +LF + +   L   S    S + +LPPGP   P+IGN+ ++ G  P H  L  LA  +GP+M LK G+V+ ++ +S  MA+EI++  D +F ++  PD + +    ++  G+ +      WR LRKIC     +++++ + + +R +++ +L+  +     A TA   G + F+ T ++ S T
Sbjct:   19 ILFIFFVFFKLVQRSDSKTSSTCKLPPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDR--PDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKI-----AATASEEGGSIFNLTQSIYSMT 194          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 44/156 (28.21%), Postives = 85/156 (54.49%), Query Frame = 3
Query:   81 LLFSWILVVALNYFSRGFKSGSR-RLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQEN 545
            ++  W ++     F +   SG + + PP P   P+IGNL +LG   H+SL  L++ +GP+M L  G+V  ++ SSA MA+EIL+  D +F N+          ++   +   P    WR ++ +C  H  S++ + + + +R ++I  ++A ++++
Sbjct:    5 IILLWSIIFMTILFLKKQLSGKKGKTPPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKS 160          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 50/187 (26.74%), Postives = 96/187 (51.34%), Query Frame = 3
Query:   81 LLFSWILVVALNYFSRGFKS-GSRRLPPGPTPYPVIGNLLELG---DKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCN--QTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRARTAIHIGQAAFDTTLNLISNTIF 623
            ++ ++ + + L++  + +K   S +LPPGP   P+IGNL +L      P ++L KL + +GP+M L+ G+++T+V SS  MA E+++  D  F    Q +      +G  +    + P    WR +RKIC     S++++ +  H+R+ + + L+  +  +  A + I +    F      +S   F
Sbjct:    8 IVITFFVFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIA--FAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSS--AGSPIDLSGKLFSLLGTTVSRAAF 190          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAH-GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRARTAIHIGQAAFDTTLNLISNTIFS 626
            S   RLPPGP  +PV+G L  LG  PH +LA +AK +GP+M LK G     V S+   AK  L+  D +F N+  P+A   H  ++   M +      W+ LRK+ N H    + L   + +R+K++  +L  + E+ R    + + +       N++   + S
Sbjct:   32 SRRHRLPPGPIGWPVLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRP-PNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLS 194          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  138 SGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNQTIPDAIYAH-GHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRARTAIHIGQAAFDTTLNLISNTIFS 626
            S   RLPPGP  +PV+G L  LG  PH +LA +AK +GP+M LK G     V S+   AK  L+  D +F N+  P+A   H  ++   M +      W+ LRK+ N H    + L   + +R+K++  +L  + E+ R    + + +       N++   + S
Sbjct:   32 SRRHRLPPGPIGWPVLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRP-PNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLS 194          
BLAST of FC930465 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 51/186 (27.42%), Postives = 98/186 (52.69%), Query Frame = 3
Query:   78 WLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCN--QTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENC--RARTAIHIGQAAFDTTLNLISNTIF 623
            +L F  +L ++L  F +   S  + LPPGP   P+IGNL +LG   +KS  K+++ +GP++ L+ G V  +V SS   A+E+L+  D   C   +T    ++ +   + G  + P    WR +RKI     FS ++L + +++R ++ + L+  + ++      +++ + +  F  T ++I    F
Sbjct:    4 FLCFLLLLPLSLILFKKLLPSKGK-LPPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIG--FAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAF 186          
The following BLAST results are available for this feature:
BLAST of FC930465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
C93B1_GLYEC4.985e-1631.69Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71D6_SOLCH4.985e-1626.70Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C99A1_SORBI6.510e-1636.69Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C75A6_CAMME6.510e-1630.48Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71DA_SOYBN6.510e-1629.51Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71AP_ARATH6.510e-1628.21Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN8.502e-1626.74Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C75A7_EUSGR1.450e-1531.10Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR1.894e-1531.10Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BZ_ARATH1.894e-1527.42Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34007H02EF PostHarvC1 Citrus clementina cDNA clone C34007H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930465 ID=FC930465; Name=FC930465; organism=Citrus clementina; type=EST; length=694bp
CACACCTGAATTTGGTGTTTCAAGAGCTTCAACAAAAGAGAGCGAGATTA
AAGATGGATATGGTAAGCTGCGTACCATGGCTTCTATTCTCGTGGATTTT
GGTCGTCGCTTTAAATTACTTTTCAAGAGGATTCAAATCTGGATCCAGAA
GGCTTCCACCGGGACCGACGCCTTATCCGGTGATCGGAAACCTCCTGGAA
CTCGGCGACAAACCTCACAAGTCACTTGCTAAACTTGCCAAGATTCATGG
CCCCATAATGAGTCTAAAATTTGGCCAGGTGACCACAGTTGTCTTTTCTT
CTGCAGCCATGGCCAAAGAAATCCTTCAAAATCAAGACACATCTTTCTGT
AATCAAACAATCCCAGACGCAATCTACGCCCACGGCCATCATGAATTCGG
GATGCCCTGGCTGCCTGTGGCGACACTGTGGAGAAATCTTCGAAAAATAT
GCAACTCACATGCTTTCTCTAGTCGCCAACTCGATGCCAATCAGCACCTT
CGGCGTAAGAAAATCCAAGATCTTCTAGCTTATGTCCAAGAAAATTGCCG
TGCACGTACAGCAATACATATTGGCCAAGCTGCTTTCGACACTACGCTTA
ATTTGATATCCAACACAATTTTTTCTATTGACTTGGCTGATCCCACATCA
GAACTGCGCGAGAGTCTAGCAAACAATTGGGGTATGATGGAAGA
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