FC930476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 63/239 (26.36%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKELVASRALEG-----IQTEVNDMDWESTFYVRHLP--QSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 L+NHG++ E ++ ++ T+ +R +++ +EG + +E +DW ++ P + + P +R+ M L K F + P GL H+DA G+ LL Q ++V+GL + KD +W+ + P+ + VVN+GD IE+++NG YKS+EHR + TD E R S+A+F++P I P P L+ Sbjct: 84 LINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLR----TVFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKE-RLSIAAFHDPEYGTKIGPLPDLV 317
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 66/243 (27.16%), Postives = 114/243 (46.91%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKELVASRALEG-----IQTEVNDMDWESTFYVRHLPQSTINEV-PDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTK----VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG-QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 + NHG+ +D +E LT + +R ++++ K + + G I + N W F V P ++ P +Y +++ ++ + G N GT+ +++YP CP+PD GL AHTD+ + +L+Q++ +GLQ+ +D W+ PP+ S+VVN+GD + ++TNG + SV HR R S+A + P SD +I P P L+ Sbjct: 76 ITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQ--WAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNN-TAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRA-RVNHVRSRFSMAYLWGPPSDIMISPLPKLV 314
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 67/246 (27.24%), Postives = 112/246 (45.53%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTVER-------LTKAHYRKCMEQRFKELVASRALE-------GIQTEVNDMDWE-STFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPAL 695 +VNHGI E + +++ L +A R C + R +E GI ++ W S+ R+ P+S + +++EEY + + G ++ NG + +++YPP P D GL HTD G+ L+ ++ + GLQ+ KD WI+V + +I+VN+GDQI +++NGKYK+V H+ + + R S +P D V+ P P L Sbjct: 31 VVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSP-PDYREVNEEYARHVKTLSEKIMEWLSEGL-----------GLGREAIKEVNGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNE-IPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKE-KTRMSWPVLVSPTYDMVVGPLPEL 262
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 38/94 (40.43%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 381 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPG 662 YPPCP+PDL G H+D + +L D ++ GLQ+ ++G W DVP + ++++N+GD +++ITN K+ S+EHRV++ R S+A F+ G Sbjct: 226 YPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTG 318
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.511e-17 Identity = 47/112 (41.96%), Postives = 73/112 (65.18%), Query Frame = 3 Query: 369 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG-QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRV-ISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 ++++YP CP+PD GL AHTD+ + +L+Q++ +GLQ+ +D W+ VPP S+VVN+GD +++NG +KSV HR ++QT R S+A + P SD I P P L+ Sbjct: 213 QLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNN-TAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQT--RARLSVAFLWGPQSDIKISPVPKLV 321
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 59/234 (25.21%), Postives = 109/234 (46.58%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTVERLTKAHYRKCMEQR--FKELVASRALEGIQTEV-----NDMDWESTFYVRHLPQ--STINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVI 677 L+NHGI E +D V+ K + +E++ + A+ ++G +++ ++WE F+ P+ + ++ P +Y G L+K GA K++ YP CP+P+L G AHTD + + + V GLQL + +W+ + +SI++++GD +E+++NGKYKS+ HR + + + R S A F P + ++ Sbjct: 88 LINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHN-MVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIV 319
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 318 GYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPA 692 GY ++ F ++ + + YPPCP+P+ G H D + +L QDD V GL++L DG+W V P+ ++V+N+GD ++NG+YKS HR + E R SLA F P D V+ P P+ Sbjct: 216 GYYREFFADSSSIM---RCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRE-RRSLAFFLCPREDRVVRPPPS 335
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 318 GYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPA 692 GY ++ F ++ + + YPPCP+P+ G H D + +L QDD V GL++L DG+W V P+ ++V+N+GD ++NG+YKS HR + E R SLA F P D V+ P P+ Sbjct: 216 GYYREFFADSSSIM---RCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRE-RRSLAFFLCPREDRVVRPPPS 335
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 38/81 (46.91%), Postives = 59/81 (72.84%), Query Frame = 3 Query: 381 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDG 623 YP CP+P+L G H+D+G + +L QD ++ GLQ+L + QWIDVP + ++V+N+ D +++ITN K+KSVEHRV++ G Sbjct: 253 YPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVG 332
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 35/92 (38.04%), Postives = 61/92 (66.30%), Query Frame = 3 Query: 381 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYN 656 +PPCP+PDL G H+D G + + D + GLQ+ ++G W DVP + ++++N+GD +++ITN K+ S++HRV++ R S+A F++ Sbjct: 226 FPPCPEPDLTFGTSKHSD-GSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFH 316 The following BLAST results are available for this feature:
BLAST of FC930476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930476 ID=FC930476; Name=FC930476; organism=Citrus clementina; type=EST; length=698bpback to top |