FC930476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13 Identity = 70/251 (27.89%), Postives = 100/251 (39.84%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFK--------------ELVASRALEGIQTEVND-MDWESTFY--VRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQ--LLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 ++NHG E M + K + E++ K E A +EG Q + + W+ T L Q +N P+ +YR+V+ GY F + YPPCP P G H D I LL QD + GLQ ++KD WI V P+ + VVNLG ++VITN K++ HRV++ + R S+A+ P I PA LL Sbjct: 63 VINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGY----FDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQD--LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRD-RVSIATLIGPDYSCTIEPAKELL 306
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 369 KVSNYPPCPKPDL-------IKGLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 ++++YPPCP + + G HTD II + + + SGLQ+ L DG WI VPP S N+GD ++V+TNG++KSV HRV++ + R S+ F P I P L+ Sbjct: 171 RLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQ-IISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCK-KSRVSMIYFAGPSLTQRIAPLTCLI 286
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 381 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG--QWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYP 683 YP CP P GL AHTD+G + Q V GLQL + G +W+ VP + ++VVN+GD +++TNG++ SV HR + + + R SL F P + + P Sbjct: 214 YPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESD-RISLGYFLGPPAHVKVAP 314
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 369 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAV-IYPAPALL 698 K++ YP CP+P+L G+ AHTD + + + V GLQ+L +W+ +I+V++GD +E+++NG+Y SV HR + + R S F P D+V ++P P L+ Sbjct: 235 KINYYPRCPQPELAVGVEAHTDVSALSFILHNG-VPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAV-RISWVVFCEPPPDSVLLHPLPELV 343
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 61/244 (25.00%), Postives = 99/244 (40.57%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTE-----VNDMDWESTFYVRHLPQSTINEVP----DLDEEYRK---VMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 +VNHGI E + R A + + ++ + L G + + + W+ T R P V L E++R+ V + ++ F G + +++ YPPC +P G H D + +L QD+ V GLQ+ +G+W + P + VVN+GD ++NG+YKS HR + + R SLA F P D V+ P L+ Sbjct: 74 VVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSK-VPRKSLAFFLCPEMDKVVAPPGTLV 312
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.949e-13 Identity = 57/223 (25.56%), Postives = 98/223 (43.95%), Query Frame = 3 Query: 3 LVNHGIQPEFMDTV----ERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNP 659 +VNHGI + + + ++L + + +RF +L + G + + + S H+ S ++ + D R ++ Y + +F N +++ Y P + GL HTD + +L QD ++ GL+L +GQWI V P ++ VN+GD + ++NG Y+SV HRVIS + E R S+A F P Sbjct: 75 IVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQY-SVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENS---FLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIE-RMSIAFFVCP 291
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 369 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 +++ YPPC +P G H D + +L QD+ V GLQ+ +G+W + P + VVN+GD ++NG+YKS HR + + R SLA F P D V+ P L+ Sbjct: 205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNS-RVPRKSLAFFLCPEMDKVVAPPGTLV 312
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 369 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 +++ YPPC +P G H D + +L QD+ V GLQ+ +G+W + P + VVN+GD ++NG+YKS HR + + R SLA F P D V+ P L+ Sbjct: 205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNS-RVPRKSLAFFLCPEMDKVVAPPGTLV 312
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 369 KVSNYPPCPKP--DLIK-GLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVISQTDGEGRTSLASFYNPGSDAVIYPAPALL 698 ++++YP + ++K G HTD II + + + +GLQ+ +KDG W+ VPP S +N+GD ++V+TNG++KSV+HRV++ T R S+ F P I P P L+ Sbjct: 185 RLNHYPAAEEEAEKMVKVGFGEHTDPQ-IISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADT-RRSRISMIYFGGPPLSQKIAPLPCLV 296
BLAST of FC930476 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 369 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK-DGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRV-ISQTDGEGRTSLASFY-NPGSDAVIYPAPAL 695 ++++YP CP+P+ GL AHTD+ + +L Q + GLQ+ + + W+ V P +VVN+GD +++NGK SV HR ++ T R S+A + P D I P L Sbjct: 208 RLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHT--RSRISIAYLWGGPAGDVQIAPISKL 316 The following BLAST results are available for this feature:
BLAST of FC930476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930476 ID=FC930476; Name=FC930476; organism=Citrus clementina; type=EST; length=698bpback to top |