FC930490

Overview
NameFC930490
Unique NameFC930490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.031e-34
Identity = 71/161 (44.10%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  258 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QG+L  +VFSF+
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DIITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFY 227          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.031e-34
Identity = 70/151 (46.36%), Postives = 97/151 (64.24%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QGLL  +VFSF+
Sbjct:   72 LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DVITVGGITVTQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGKVTPLFDNIISQGLLKEDVFSFY 221          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            L N+MDAQY+GEIGIG+PPQ F+V+FDTGS+NLWVPS  C    I+C+ H +Y S KS+TY + G + +I+YGSGS+SG+ SQ                       F EA ++  + F+ A+FDGI+G+ +  I+V + +PV+DN++ Q L+ + VFSF+
Sbjct:   46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMRQKLVDKNVFSFF 205          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34
Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 3
Query:  282 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSI-SCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            +P+ +F DAQY+G I IG+P Q F V+FDTGSSNLW+PS KC  ++ +C  H++Y S  S+TY   G    I YGSG++SGF SQ              F EAT E  + F  A+FDGI+GL F+ I+V    PV+ NM+ QGL+   +FSFW
Sbjct:   53 IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSFW 205          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34
Identity = 71/161 (44.10%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  258 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QG+L  +VFSF+
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DIITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNILSQGVLKEDVFSFY 227          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.465e-34
Identity = 71/161 (44.10%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  258 LGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            LG++   ++ L N+MD QY+GEIGIG+PPQ F V+FDTGSSN+WVPSSKC     +C +H  + +  S++Y   G    + Y +G++SGF SQ              F E T   +L F+LA FDG++G+GF E A+G   P++DN++ QG+L  +VFSF+
Sbjct:   69 LGNTTSSVI-LTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQ-DIITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNILSQGVLKEDVFSFY 227          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34
Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = 3
Query:  231 AGVSGVHHRLG-DSDEDILP--LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            AG + + H  G  S     P  LKN+MDAQY+GEIG+G+P Q F+V+FDTGSSNLW+PS  C F+ I+C  H +Y   KS+TY + G    I YGSGS+SG+ SQ              F EA ++  + F+ A+FDGI+G+ +  I+V    PV+D M+ Q  + + VFSF+
Sbjct:   46 AGTNSLQHNQGFPSSNAPTPETLKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVVEKQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVPPVFDMMMSQKKVEQNVFSFY 218          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.246e-33
Identity = 72/151 (47.68%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  285 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            PL N+MD +YFGEI +G+PPQNF+VIFDTGSSNLWVPS  C  S +C  H R++ + S+TY   G +  + YG+GS+SG                  F E+  E   TF+ A FDGI+GLG+  IAVGD  PV+DNM+ Q L+   +FS +
Sbjct:   65 PLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDCTPVFDNMIAQNLVELPMFSVY 214          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.933e-33
Identity = 72/151 (47.68%), Postives = 98/151 (64.90%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            L N+++ QY+GEIGIG+PPQ F VIFDTGS+NLWVPS+KC    ++C  HS Y+S  S++Y E G    I+YGSG + GF SQ              F E T    + F+LA+FDG++G+GF   AVG   PV+D+++ QG+L  EVFS +
Sbjct:   76 LTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLSQ-DSVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVY 225          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.003e-33
Identity = 73/151 (48.34%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  285 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            PL N+MD QYFGEI IG+PPQNF+VIFDTGSSNLWVPS  C  S +C  H+R++ + S+TY   G +  + YG+GS+SG                  F E+  E   TF+ A FDGI+GLG+  IAVG   PV+DNM+ Q L+   +FS +
Sbjct:   65 PLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGCTPVFDNMIAQNLVELPMFSVY 214          
The following BLAST results are available for this feature:
BLAST of FC930490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
RENI_HUMAN2.031e-3444.10Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
RENI_CALJA2.031e-3446.36Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
CATD_SHEEP2.653e-3445.00Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATD_DICDI2.653e-3447.06Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
RENI_MACMU3.465e-3444.10Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]
RENI_MACFA3.465e-3444.10Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
CATD_CLUHA4.525e-3443.93Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATEA_XENLA2.246e-3347.68Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
RENI1_MOUSE2.933e-3347.68Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
CATEB_XENLA5.003e-3348.34Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC34008B03EF PostHarvC1 Citrus clementina cDNA clone C34008B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930490 ID=FC930490; Name=FC930490; organism=Citrus clementina; type=EST; length=739bp
GGACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGAAAAC
CAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGG
GTGCTAGCGTCGTTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGAA
TTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCTGCAAGA
ATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGCA
CCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAACTTTA
TGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCACAAAAT
TTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCCATCTTC
AAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACAAGTCCA
GAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTAT
GGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTGG
GGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGGA
GTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTTC
CGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTGA
GCAGGGCCTTTTGTAGCGAGAGGTCTTCTCATTCTGGCT
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