FC930490

Overview
NameFC930490
Unique NameFC930490
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.535e-33
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 3
Query:  198 RITRKERYMGGAGVSGVHHRL------GDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-FSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            R + KER +  AG+    ++       G+S   ++ L N++D QY+GEIGIG+PPQ F V+FDTGS+NLWVPS++C     +C  H  Y S +S++Y E G +  I YGSG + GF SQ              F E T    + F+LA+FDG++G+GF   AVG   PV+D+++ QG+L  EVFS +
Sbjct:   42 RESLKERGVDVAGLGAEWNQFTKRLSSGNSTSPVV-LTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQ-DMVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVY 226          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32
Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            L N++++QY+GEIGIG+PPQ F VIFDTGS+NLWVPS+KC    ++C  HS Y+S  S++Y E G    I+YGSG + GF SQ              F E T    + F+LA+FDG++G+GF   AVG   PV+D+++ QG+L  +VFS +
Sbjct:   75 LTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQ-DSVTVGGITVTQTFGEVTELPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEKVFSVY 224          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32
Identity = 68/152 (44.74%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  282 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            +PL N+++AQY+ +I +G+PPQNF VI DTGSSNLWVPS++C  S++C+ HS+Y    S++Y   G    I YG+GS+ G+ SQ              F EAT E  LTF   +FDGI+GLG+  I+V   VP + N ++Q LL  + F+F+
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFY 231          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.532e-32
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 3
Query:  285 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            PL N++D +YFG I IGSPPQNF+VIFDT SSNLWVPS  C  S +C  H +++  +SNTY+E+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+DNM+ Q L+   +FS +
Sbjct:   69 PLINYLDMEYFGTISIGSPPQNFTVIFDTVSSNLWVPSVYCT-SPACQMHPQFRPSQSNTYSEVGTPFSIAYGTGSLTGIIGADQVSVQGLTVVGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVSLPMFSVY 218          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.532e-32
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  285 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFF-----SQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            PL N++D +YFG I IGSPPQNF+VIFDTGSSNLWVPS  C  S +C  HSR++  +S+TY++ G+S  I YG+GS+SG       S               F E+  E   TF+ A FDGI+GLG+  +AVG   PV+DNM+ Q L+   +FS +
Sbjct:   69 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVY 223          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.436e-32
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 3
Query:  285 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            PL N++D +YFG I IG+PPQNF+VIFDTGSSNLWVPS  C  S +C  H  +   +S+TYTE+G    I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+DNM+ Q L+   +FS +
Sbjct:   70 PLINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYCT-SPACKAHPVFHPSQSDTYTEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVDGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVALPMFSVY 219          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.232e-31
Identity = 70/151 (46.36%), Postives = 92/151 (60.93%), Query Frame = 3
Query:  285 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            PL N++D +YFG I IGSPPQNF+VIFDTGSSNLWVPS  C  S +C  H  +    S+TY E+G S  I YG+GS++G                  F E+ +E   TF+ A FDGI+GLG+  +A G   PV+DNM+ Q L+   +FS +
Sbjct:   65 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTVVGQQFGESVQEPGKTFVHAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVALPMFSVY 214          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            ++N++DA+YFG I IG+PPQ+F+VIFDTGSSNLWVPS+ C  S++C  H R+    S+TY    ++  I YG+GS++G                  F  +  E SLTFL A FDGI+GL +  I+  DA PV+DNM  +GL+ +++FS +
Sbjct:   67 MENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSQDLFSVY 215          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.102e-31
Identity = 71/151 (47.02%), Postives = 94/151 (62.25%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCY-FSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            L N++D QY+GEIGIG+PPQ F VIFDTGS+NLWVPS+KC     +C  HS Y S +S++Y E G    I YGSG + GF SQ              F E T      F+LA+FDG++G+GF   AVG   PV+D+++ Q +L  +VFS +
Sbjct:   72 LTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQ-DLVTVGGITVTQTFGEVTELPLRPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILAQRVLTEDVFSVY 221          
BLAST of FC930490 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31
Identity = 67/150 (44.67%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  288 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLL*REVFSFW 737
            L+N++DA+YFG I IG+PPQ+F+VIFDTGSSNLWVPS+ C  S++C  H R+    S+TY    ++  I YG+GS++G                  F  +  E  LTFL A FDGI+GL +  I+  DA PV+DNM  +GL+ +++FS +
Sbjct:   67 LENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYC-SSLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPGLTFLFAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSQDLFSVY 215          
The following BLAST results are available for this feature:
BLAST of FC930490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
RENI_CANFA6.535e-3341.71Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
RENI2_MOUSE1.115e-3247.02Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
CARP_YEAST1.115e-3244.74Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
CATE_RABIT5.532e-3245.70Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
CATE_HUMAN5.532e-3247.44Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
CATE_MOUSE9.436e-3245.70Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
CATE_CAVPO1.232e-3146.36Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
PEPA2_RABIT1.610e-3144.67Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
RENI_SHEEP2.102e-3147.02Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPA4_RABIT2.745e-3144.67Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34008B03EF PostHarvC1 Citrus clementina cDNA clone C34008B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930490 ID=FC930490; Name=FC930490; organism=Citrus clementina; type=EST; length=739bp
GGACATTATCTTCACTTTACCTTGCTTCAAACTCAGCTTCAGCAGAAAAC
CAAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGG
GTGCTAGCGTCGTTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGAA
TTGGCTTGAAGAAGCGGCGTCTAGATCTTCATAGTCTAAATGCTGCAAGA
ATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGCA
CCATCGTTTGGGTGATTCAGATGAAGATATTTTGCCTTTGAAGAACTTTA
TGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCACAAAAT
TTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCCATCTTC
AAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACAAGTCCA
GAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTAT
GGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTGG
GGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGGA
GTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTTC
CGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTGA
GCAGGGCCTTTTGTAGCGAGAGGTCTTCTCATTCTGGCT
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