FC930510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 144 FDLKPPPYPLNALEP-HMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA--FNNAAQAWNHDFFW 389 F+L PY +AL MSK+TLE+H HH+AYVDN NK I GTE +GKS+E++V +Y G + + FNNA+Q WNH FW Sbjct: 3 FELPALPYAHDALASLGMSKETLEYHHDLHHKAYVDNGNKLIAGTE-WEGKSVEEIVKGTYCAGAVAQSGIFNNASQHWNHAQFW 86
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_RICTY (Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi GN=sodB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.328e-13 Identity = 40/116 (34.48%), Postives = 56/116 (48.28%), Query Frame = 3 Query: 117 KTGGRISAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGS 464 + + S F L PY + +PH + +T ++H GKHH +YV NLN + E K LE ++ S +K + FNNA+Q WNH FFW I +DFGS Sbjct: 5 RKANQTSYPFILPDLPYAKESFKPHFTCETFDYHHGKHHNSYVQNLNNLLKDREELQKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGS 119
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.328e-13 Identity = 39/110 (35.45%), Postives = 54/110 (49.09%), Query Frame = 3 Query: 135 SAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGS 464 S F L PY + +PH +++T ++H GKHH +YV NLN I E K LE+++ S + + NNA+Q WNH FFW I +DFGS Sbjct: 11 SYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEWSSQNAE-VAILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGS 119
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.734e-13 Identity = 40/110 (36.36%), Postives = 53/110 (48.18%), Query Frame = 3 Query: 135 SAKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGS 464 S F L PY + +PH + +T ++H GKHH YV NLN + E K LE+++ S ++ FNNAAQ WNH FFW I +DFGS Sbjct: 11 SYPFILPDLPYEKESFKPHFTLETFDYHHGKHHNTYVQNLNNLLKDKEELQKKDLEEIIEWS-SQNSNAAIFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGS 119
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 2.265e-13 Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 3 Query: 144 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW 389 F+L PY +AL P+MS++TLE+H KHH AYV N NK L D SLED+V SY G P FNNA Q +NH FW Sbjct: 3 FELPNLPYDYDALAPYMSRETLEYHHDKHHLAYVTNGNKLAEEAGLSD-LSLEDIVKKSY--GTNQPLFNNAGQHYNHVHFW 81
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.243e-11 Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 3 Query: 162 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGS 464 PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S +G + FNNA Q NH+ ++ I++ FGS Sbjct: 9 PYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS--EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGS 103
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.120e-11 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 144 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHD-FFWXXXXXXXXXXXXXXXXXLIERDFGS 464 +++ PY NALEP +S+ T+++H+GKH + YV+NLN + GTE +GK++E ++AS G + FNNA Q NH +F I+RDFGS Sbjct: 3 YEMPKLPYANNALEPVISQQTIDYHYGKHLQTYVNNLNSLVPGTEY-EGKTVE-AIVASAPDGAI---FNNAGQVLNHTLYFLQFAPKPAKNEPAGKLGEAIKRDFGS 105
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.769e-11 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 144 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW 389 F+L+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYF 77
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.769e-11 Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 3 Query: 144 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW 389 F+L+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYF 77
BLAST of FC930510 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.169e-11 Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 3 Query: 138 AKFDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV--VIASYNKGDLLPAFNNAAQAWNHDFFW 389 A+F P PY NAL+P + + T+E H+GKHH+AYVDNLN QI D L + I+ YN NN +NH FFW Sbjct: 23 AEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQISKYNTA----VRNNGGGHFNHTFFW 104 The following BLAST results are available for this feature:
BLAST of FC930510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930510 ID=FC930510; Name=FC930510; organism=Citrus clementina; type=EST; length=528bpback to top |