FC930520

Overview
NameFC930520
Unique NameFC930520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB1A_NEUCR (Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neurospora crassa GN=fkr-2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACR 511
            VDVHY+G L  +G+ FD +++     +F +G+G VI+ WD  L  MK+GE  KLT  P  AYG+      +P ++TLIFE ELV  +
Sbjct:   29 VDVHYKGVLT-SGKKFDASYDRGEPLNFTVGQGQVIKGWDEGLLGMKIGEKRKLTIAPHLAYGNRAVGGIIPANSTLIFETELVGIK 114          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP2_GIBZE (FK506-binding protein 2 OS=Gibberella zeae GN=FPR2 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            V +HY G+L ++G+ FD +++  T  SF++G G VI+ WD  L  M +GE   LT  PE+ YG     P +P  +TL+FE ELV
Sbjct:   42 VHMHYRGTLKDSGKQFDASYDRGTPLSFKVGAGQVIKGWDEGLLDMCIGEKRVLTIPPEFGYGQRAIGP-IPAGSTLVFETELV 124          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP2_MOUSE (FK506-binding protein 2 OS=Mus musculus GN=Fkbp2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACRPR 517
            ++ +HY G L E G  FD++   N  F F LG G VI+ WD  L  M  GE  KL    E  YG  G+PP +P  ATL+FEVEL+    R
Sbjct:   49 VLHMHYTGKL-EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERR 137          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP2_HUMAN (FK506-binding protein 2 OS=Homo sapiens GN=FKBP2 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACRPR 517
            ++ +HY G L E G  FD++   N  F F LG G VI+ WD  L  M  GE  KL    E  YG  G+PP +P  ATL+FEVEL+    R
Sbjct:   51 VLHMHYTGKL-EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERR 139          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP2_BOVIN (FK506-binding protein 2 OS=Bos taurus GN=FKBP2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACRPR 517
            ++ +HY G L E G  FD++   N  F F LG G VI+ WD  L  M  GE  KL    E  YG  G+PP +P  ATL+FEVEL+    R
Sbjct:   49 VLHMHYTGKL-EDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERR 137          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP4_RHIOR (FK506-binding protein 4 OS=Rhizopus oryzae GN=FKBP4 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACR 511
            V + Y G L   G+VFD  +     FSF LG+G VI+ WD+ +  MK G   KLT     AYG  G+PPD+P +ATL+F+V+L++ +
Sbjct:  298 VGMRYIGKLTN-GKVFDK-NVSGKPFSFLLGRGEVIKGWDLGIAGMKAGGERKLTIPAPLAYGKRGAPPDIPKNATLVFDVKLLSMK 382          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP_YARLI (FK506-binding protein 1 OS=Yarrowia lipolytica GN=FPR1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 2
Query:  200 VRQAKP-DALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            V+Q +P D  +  +    V +HY G+L E G+ FD++ +    F   +G G VIR WD  +  + +GE + LT   +Y YG  G P  +PP+ATL+F+VEL+
Sbjct:    5 VKQLQPGDGKTYPKKGDAVTIHYVGTL-ENGQKFDSSRDRGEPFKTTIGVGDVIRGWDEGVPKLSLGERSVLTISGDYGYGERGFPGLIPPNATLVFDVELL 105          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP2_DEBHA (FK506-binding protein 2 OS=Debaryomyces hansenii GN=FPR2 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            L+ VHYEG L E G VFD+++      SF+LG G VI+ WD  L  M +GE  KLT     AYG  G  P +P  ATL+F  ELV
Sbjct:   42 LISVHYEGKL-EDGTVFDSSYSRGQPISFQLGIGQVIQGWDQGLTRMCIGEKRKLTIPSHLAYGDRGVGP-IPAKATLVFVAELV 124          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP3_RABIT (FK506-binding protein 3 OS=Oryctolagus cuniculus GN=FKBP3 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTV-------FSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSP-PDVPPDATLIFEVELV 502
            +V   Y G+L + G VFDT  + ++         SF++G G VIR WD AL +M  GE A+L  +PE+AYG  G P   +PP+A LIFEVELV
Sbjct:  130 VVHCWYTGTLQD-GTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLIFEVELV 221          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP3_BOVIN (FK506-binding protein 3 OS=Bos taurus GN=FKBP3 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTV-------FSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSP-PDVPPDATLIFEVELV 502
            +V   Y G+L + G VFDT  + ++         SF++G G VIR WD AL +M  GE A+L  +PE+AYG  G P   +PP+A LIFEVELV
Sbjct:  130 VVHCWYTGTLQD-GTVFDTNIQTSSKKKKNAKPLSFKVGIGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLIFEVELV 221          
The following BLAST results are available for this feature:
BLAST of FC930520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FKB1A_NEUCR2.052e-1343.68Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neuro... [more]
FKBP2_GIBZE2.680e-1342.86FK506-binding protein 2 OS=Gibberella zeae GN=FPR2... [more]
FKBP2_MOUSE3.500e-1344.44FK506-binding protein 2 OS=Mus musculus GN=Fkbp2 P... [more]
FKBP2_HUMAN3.500e-1344.44FK506-binding protein 2 OS=Homo sapiens GN=FKBP2 P... [more]
FKBP2_BOVIN3.500e-1344.44FK506-binding protein 2 OS=Bos taurus GN=FKBP2 PE=... [more]
FKBP4_RHIOR5.971e-1343.68FK506-binding protein 4 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP_YARLI1.018e-1238.24FK506-binding protein 1 OS=Yarrowia lipolytica GN=... [more]
FKBP2_DEBHA1.018e-1248.24FK506-binding protein 2 OS=Debaryomyces hansenii G... [more]
FKBP3_RABIT2.963e-1246.24FK506-binding protein 3 OS=Oryctolagus cuniculus G... [more]
FKBP3_BOVIN3.870e-1246.24FK506-binding protein 3 OS=Bos taurus GN=FKBP3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34008D10EF PostHarvC1 Citrus clementina cDNA clone C34008D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930520 ID=FC930520; Name=FC930520; organism=Citrus clementina; type=EST; length=751bp
GACTCACTAGACGCCTATGGCCACCAAAATCCACGGCAATTTCTCCCGAT
TTATTGTCCCCGAGTCAATCGGTCAACTCGATCTCTCTTTTACGGTCGAT
AATTTTCATCTCATCACGATACGGTAGGGTTTTAAGCATTGAGAAGTTAT
GGGTGATTCAATTGATTTGACGGGTGATGAAGGTGTCATCAAGAAGATCG
TAAGGCAAGCTAAACCTGATGCTCTCTCTCCTACTGAGGACCTTCCTCTT
GTTGATGTTCATTATGAAGGCAGTCTTGCTGAAACTGGTGAAGTTTTCGA
TACCACACATGAAGACAATACTGTATTTTCTTTTGAGCTTGGGAAGGGTT
CAGTGATTCGGGCTTGGGATATTGCATTAAGAAGCATGAAGGTTGGGGAG
GTTGCAAAACTCACTTGCAAGCCAGAATATGCCTATGGCAGTGCAGGATC
TCCTCCAGATGTCCCACCTGATGCGACACTTATTTTTGAGGTGGAGTTGG
TGGCCTGCAGGCCAAGGAAAGGTTCTAGTCTTGGTAGCGTATCGGAAGAG
AGAGCCAGGCTAGAGGAGCTTAAGAGGCAAAGAGAGCTTGCTGCTGCTGC
GAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCCNAAGCTGCAGCAGCTG
CTCGTATTCAAGCCAAATGGAAGCCAAGAAGGTCAGGAAAGGGGAAAGCA
AGGGGAAATAGGGTATGTATCCCGCTCATATGGATAGCGATATGTGTGAT
G
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