FC930539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_CYACA (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium caldarium GN=pdhB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.903e-37 Identity = 74/170 (43.53%), Postives = 112/170 (65.88%), Query Frame = 2 Query: 215 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 + M + EAL +A+DEEM D VF++GE+VG Y G+YK++K L KYG RVLD PI E FTG+ +GAA GL+P+VE M F + A + I N+ + Y S G ++P+V RGP G + A+HSQ + + S+PGL++++ ++ +A+GLLK+AI + P++F Sbjct: 1 MSMMFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAENSFTGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGGIGKQLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILF 170
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_MESVI (Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma viride GN=pdhB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.364e-35 Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 236 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 EALN A+DEEM+ + KV L+GE++G Y G+YK+++ L KYG RV+DTPI E F G +GAA GL VVE M F + A I N+ + S G +PIV RGP G +GA+HSQ ++ SVPGL++++ + +A+GLLK+AIR +P+ F Sbjct: 8 EALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAENSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQISNNMGMLSATSGGHYHIPIVLRGPGGVGKQLGAEHSQRLECYFQSVPGLQIVACSTPYNAKGLLKSAIRSKNPIFF 170
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_CHLAT (Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus atmophyticus GN=pdhB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.781e-35 Identity = 75/163 (46.01%), Postives = 105/163 (64.42%), Query Frame = 2 Query: 236 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 EAL A+DEEM + +V L+GE++G Y G+YK+++GL KYG RV+DTPI E F G VGAA GL PVVE M F + A I N+ S G VP+V RGP G +GA+HSQ +++ SVPGL++++ + +A+GLLK+AIR +P++F Sbjct: 8 EALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAAVGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGGIGKQLGAEHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILF 170
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32 Identity = 71/179 (39.66%), Postives = 107/179 (59.78%), Query Frame = 2 Query: 218 KQMMVREALNSALDEEMSADPKVFLMGEEV-------GE---YQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 +++ ++ A+N A+D+EM+ DP V ++GE++ GE + G ++KGL K+G +R+LDTP++E+ + G +GAA G++P+ E M +F D I N AAK YM G+ P+V R GA AQHSQ + +PGLKV+ P + D +GLL AIRD DPV+F Sbjct: 3 RKLSIKLAINEAIDQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHG-DRLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAETPVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIF 180
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.148e-32 Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = 2 Query: 236 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 EA+N A+D+ M D + + GE+ G G ++++ GL +KYG RV DTPI E+ G VG A GLKP+ E F ++ AA+ S GQ +VP+V R P+G HS+ + S+PGLKV++P + DA+GLL AAI DPDPVVF Sbjct: 8 EAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLKPIAEIQFDGFIFPGYTDLVTHAARMRNRSRGQFTVPMVLRLPHGGGIRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVF 170
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.725e-30 Identity = 71/163 (43.56%), Postives = 91/163 (55.83%), Query Frame = 2 Query: 236 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 EAL +A+D + DP V L G++ G G ++ +KGL +KYG ERV D PI EA GIGVGAA GLKP+VE FS A+ I AA+ S G + PI+ R P G HS+ A Y + GLK + P + D +GL AA+ PDPVVF Sbjct: 11 EALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCPIIVRMPMGGGIKALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVF 173
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 71/163 (43.56%), Postives = 91/163 (55.83%), Query Frame = 2 Query: 236 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 EALN+A+D + D V L G++ G G ++ +KGL +KYG ERV D PI E GIGVGAA GLKP+VE FS A+ I AA+ S G + P+V R P G HS+ A YA + GLK + P + D +GL AAI PDPV+F Sbjct: 10 EALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAPLVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIF 172
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 68/173 (39.31%), Postives = 99/173 (57.23%), Query Frame = 2 Query: 206 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 + V M + +AL SA+D + D V + G++VG + G ++ ++GL +KYG RV D PI+E+G G VG YGL+PVVE ++ A D +I+ AA+ Y S+G VP+ R P G G HSQ A + V GL+ + P + DA+GLL A I + DPV+F Sbjct: 11 AQTVTSMTMIQALRSAMDIMLERDDDVVVFGQDVGYFGGVFRCTEGLQKKYGTSRVFDAPISESGIIGAAVGMGAYGLRPVVEIQFADYVYPASDQLISEAARLRYRSAGDFIVPMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIF 183
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 1.118e-29 Identity = 72/175 (41.14%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 236 EALNSALDEEMSADPKVFLMGEEVG------------EYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 +A+N A+ M D V L+GE+V + G ++KGL++++G RVLDTPI+EAG+ G + AA GL+P+ E M +F D +IN AK YM G+ VPI R GA AQHSQ + S+PGLK + P + DA+GLL AAI D DPV F Sbjct: 9 DAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQVPITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFF 183
BLAST of FC930539 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.907e-29 Identity = 62/170 (36.47%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 215 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 724 V+ + + +ALN+ L + + ADPKV ++GE+VG G +++++GL ++G RV+DTP+ EAG G +G A G +PVVE F D I AK SG +S+P+V R P+G G H + A++A GL++++P + DA +++ AI DPV+F Sbjct: 14 VQSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSMPVVIRIPHGGHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIF 183 The following BLAST results are available for this feature:
BLAST of FC930539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930539 ID=FC930539; Name=FC930539; organism=Citrus clementina; type=EST; length=725bpback to top |