FC930569
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: PTC_STRRT (Putrescine carbamoyltransferase OS=Streptococcus ratti GN=ptcA PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 2 Query: 197 EQTDFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHV---GRLEGTKVVYVGDGNT*C 688 ++TD++ DF K ++K++D + ++KA +K+G L + K++ MIF + S RTRVSFET S LGGHA YL P IQ+G E D + VL R +DI+MARV HQ ++DLA+ A++PVING++DYNHP Q + D T+IEH+ +LE KVV+VGD C Sbjct: 3 KKTDYITTEDFSKEELLKLVDLSLKIKACIKNGYYPPL-LEHKSLGMIFQQTSTRTRVSFETAMSQLGGHAQYLAPGQIQLGGHETIEDTSTVLSRLDDILMARVERHQSVVDLARCASIPVINGMSDYNHPTQELGDLCTMIEHLPAGKKLEDCKVVFVGDATQVC 168
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: PTC_STRMU (Putrescine carbamoyltransferase OS=Streptococcus mutans GN=ptcA PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36 Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 2 Query: 197 EQTDFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHV---GRLEGTKVVYVGDGNT*C 688 ++TD++ DF K ++K++D + ++KA +K+G L + K++ MIF + S RTRVSFET S LGGHA YL P IQ+G E D + VL R +DI+MARV HQ ++DLA+ A++PVING++DYNHP Q + D T+IEH+ +LE KVV+VGD C Sbjct: 3 KKTDYITTEDFSKEELLKLVDLSLKIKACIKNGYYPPL-LEHKSLGMIFQQTSTRTRVSFETAMSQLGGHAQYLAPGQIQLGGHETIEDTSTVLSRLDDILMARVERHQSVVDLARCASIPVINGMSDYNHPTQELGDLCTMIEHLPAGKKLEDCKVVFVGDATQVC 168
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_ACIAD (Ornithine carbamoyltransferase OS=Acinetobacter sp. (strain ADP1) GN=argF PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35 Identity = 75/160 (46.88%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 209 FLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNT*C 688 FL + D + ILDRA+E+K + ++ + PFKGK + MIF K S RTR+SFE G GG AI+L P D Q+G+ E D+ARV+ DI+M R FGH + A ++ VPVINGLTD +HPCQ++AD T EH G ++G V ++GDGN C Sbjct: 6 FLTLRDLSSLELNSILDRASELKRQ-QHANQVYQPFKGKVLGMIFEKSSTRTRISFEAGICQFGGSAIFLSPRDTQLGRGEPIEDSARVISSMLDIVMIRTFGHNIVERFASFSKVPVINGLTDDHHPCQLLADLQTYQEHRGSIKGKTVAWIGDGNNMC 164
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_PSYWF (Ornithine carbamoyltransferase OS=Psychrobacter sp. (strain PRwf-1) GN=argF PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35 Identity = 73/161 (45.34%), Postives = 104/161 (64.60%), Query Frame = 2 Query: 209 FLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNT*CT 691 FL + D A + ++ RA+E++ + +G+ + PF G+T+ MIF K S RTR+SFETG GGHAI+L P D Q+G+ E D+ARV+ DIIM R F H+ + A+Y++VP+IN LTD HPCQ++AD T EH G ++ V +VGDGN C+ Sbjct: 6 FLTLLDLSPAELEALIKRASELRKMQHAGE-VYQPFVGRTLGMIFEKSSTRTRISFETGMGQFGGHAIFLSPKDTQLGRGEPIEDSARVISSMVDIIMIRTFEHEKVEKFAQYSSVPIINALTDDFHPCQLLADMQTFYEHRGSIKDKIVTWVGDGNNMCS 165
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_METHJ (Ornithine carbamoyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=argF PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35 Identity = 74/162 (45.68%), Postives = 105/162 (64.81%), Query Frame = 2 Query: 206 DFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNT*CT 691 DF+ I D + + ++ A ++K + G ++ + KT+ MIF K S RTR+SFE G LGGHA++L P D+Q+G+ E RD ARV+ R+ IM R H ++L+LA +A +PVINGL+D HPCQI+AD +TI E + R EG KV ++GDGN CT Sbjct: 4 DFISILDISREELANLIAHARKLKEERRVGIQTPV-LAHKTLGMIFEKSSTRTRISFEAGMFELGGHALFLNPKDMQLGRGEAIRDTARVMSRFVSAIMIRANRHDEVLELAAHADIPVINGLSDREHPCQILADIMTIEERLFRTEGVKVAWIGDGNNVCT 164
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_PELCD (Ornithine carbamoyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=argF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35 Identity = 73/158 (46.20%), Postives = 102/158 (64.56%), Query Frame = 2 Query: 206 DFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGN 679 DFL ++D+ + + AA++KA K+G++ L KGKT+ M+F K S RTRVSFE G LGGHA++L QMG+ E +D RV+ RY D IM R F + + +LA+++T+P+INGLTD HPCQ+MAD LT+IEH ++GDGN Sbjct: 4 DFLCLTDWSLEELENLFTLAADLKAKQKAGEQHHL-LKGKTLGMLFEKSSTRTRVSFEVGMYQLGGHALFLSSGSTQMGRGEPIKDTGRVMSRYVDGIMIRTFSQEGVEELAQWSTIPIINGLTDMYHPCQVMADLLTVIEHKKNYRDLTYCWIGDGN 160
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_METAC (Ornithine carbamoyltransferase OS=Methanosarcina acetivorans GN=argF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35 Identity = 77/161 (47.83%), Postives = 102/161 (63.35%), Query Frame = 2 Query: 206 DFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNT*C 688 D L I+D K I ++L+ AA++KA K+G+ + K K++ MIF K S RTRVSFE + GGHA+YL DIQ+G+ E D AR L Y +MARV H + LAKY+T+PVIN L+D HPCQI+ D +TI+E + EG K +VGDGN C Sbjct: 4 DVLSITDLSKEEIYELLESAADLKAKRKAGESTEY-LKNKSLGMIFEKSSTRTRVSFEVAMTDFGGHALYLNSRDIQVGRGETIEDTARTLSGYLHGLMARVMSHDTVEKLAKYSTMPVINALSDREHPCQILGDFMTIMEFKKKFEGLKFAWVGDGNNVC 163
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_CHLTE (Ornithine carbamoyltransferase OS=Chlorobium tepidum GN=argF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35 Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 2 Query: 194 AEQTDFLHISDFDKATIVKILDRAAEVKALLKSGDRS--FLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGN 679 +++ DFL + D A I+++ D + +K ++ S F P + KT++MIF KPS+RTRVSFE G LGGHAI L I +G+RE D AR+L RYND I+AR+ H+ I LAK+A +PVIN LTD +HPCQ++ADA T+ E + KVV+VGDGN Sbjct: 10 SKKRDFLGFTGLDAAKIIELFDYSLFIKQQRETNRNSDEFRPIRHKTVAMIFNKPSLRTRVSFELGVYELGGHAISLEGKSIGVGERESIEDIARLLSRYNDAIVARLHEHEIIETLAKHADIPVINALTDLSHPCQVLADAFTLYEKGLWRDDIKVVFVGDGN 173
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_SYNAS (Ornithine carbamoyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=argF PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34 Identity = 76/158 (48.10%), Postives = 101/158 (63.92%), Query Frame = 2 Query: 206 DFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGN 679 D L I D + I ++A +K++ + G ++ P KGKT+ MIF K S RTR+SFE G LGG A++L D Q+G+ E D+AR++ RY + IM R F H I + A +AT+PVINGLTD HPCQI++D TIIE G E K+VYVGDGN Sbjct: 4 DLLSIYDLEAGDFKAIFEKARHLKSVHEQGV-AYTPLKGKTLGMIFDKSSTRTRISFEVGMYQLGGLALFLSNRDTQLGRGETVADSARIMSRYLNGIMIRTFSHLIIEEFAAHATIPVINGLTDLLHPCQILSDLFTIIEKKGSYERLKIVYVGDGN 160
BLAST of FC930569 vs. ExPASy Swiss-Prot
Match: OTC_METS3 (Ornithine carbamoyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=argF PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34 Identity = 76/162 (46.91%), Postives = 104/162 (64.20%), Query Frame = 2 Query: 203 TDFLHISDFDKATIVKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNT*C 688 ++ L + D K ++ IL+ A K G P GK+++MIF K S RTRVSF+ G LGG A++L ++QMG+ E D A+VL R+ D IM R H D+++LAKY+ VPVI+GLT+ HPCQ +AD LTI EH+G+LEG K+ +VGDGN C Sbjct: 2 SNLLSVCDI-KDEVLDILELAKN----FKEGKMEEKPLAGKSLAMIFQKSSTRTRVSFDVGMYQLGGQALFLSSSELQMGRGEPIPDTAKVLSRFVDGIMIRAIEHDDVVELAKYSDVPVISGLTNLEHPCQALADMLTIQEHLGKLEGKKLCFVGDGNNVC 158 The following BLAST results are available for this feature:
BLAST of FC930569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 498
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930569 ID=FC930569; Name=FC930569; organism=Citrus clementina; type=EST; length=722bpback to top |