FC930611
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 76/190 (40.00%), Postives = 106/190 (55.79%), Query Frame = 1 Query: 13 NEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQV-DSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPS 579 N+ L+ AA+ S NWV+ N+ YYPA I+ +A GNEV+ T +VPAM+N+ +L L +KVS+ I A+ N++PPS+G F + + + L T + L+ N YP+FAY N I L+YA FR V D GL LFDA +DAV AA+ V+VVV+E+GWPS Sbjct: 58 NDVLASLAANASNAANWVRDNVRPYYPAVNIKYIAAGNEVWG---GDTQNIVPAMRNLGAALKAPGL-GTIKVSTSIRFDAVTNTFPPSNGVF----AQAYMTDVARLLASTGAPLLTNVYPYFAYKDNPRDIQLNYATFRPGTTTVRDPNTGLTSQCLFDAMVDAVVAALERSGAPGVRVVVSESGWPS 239
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27 Identity = 76/195 (38.97%), Postives = 110/195 (56.41%), Query Frame = 1 Query: 1 VAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVG 585 V PN+ LS AA + +WV++NI Y P V VGNEV T LVPAMKNV+ +LV L ++KV++ ++ L PPS+GSF + + P+++FL +T++ LM N YP+ A++ N + + YALF + G V Y NLFD +DA + AM + VK+VV+E+GWPS G Sbjct: 58 VGAPNDVLSNLAASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG---GATRNLVPAMKNVHGALVAAGL-GHIKVTTSVSQAILGVFSPPSAGSFTGEAAA-FMGPVVQFLARTNAPLMANIYPYLAWAYNPSAMDMGYALFNAS-GTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGG 245
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.537e-26 Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 1 Query: 10 PNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQ--VDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVG 585 PN +L + A Q+ + WV+ N+ KY + + ++VGNEV L+ AM+N+ +L L SN+KVS+ +G +N+YPPS G FK D L+P++ FL S L+VN Y +F Y N D +SL +AL + N D N L+Y N FDA LD+V+AA+ + VVV+E+GWP+ G Sbjct: 81 PNGDLKRLADSQAEANTWVRDNVQKYNDV-RFKYISVGNEVKPGEPGAAA-LIQAMQNIDRALSAAGL-SNIKVSTTTFMGPSRNTYPPSRGRFK-DEYRNFLQPVIGFLVNKRSPLLVNIYTYFGYM-NRD-VSLQFALLQPNSNNEFTDPNNQLRYLNFFDANLDSVYAALEKSGGGSLDVVVSESGWPTQG 268
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 3.663e-26 Identity = 59/150 (39.33%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 148 NTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRD---NPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVGD 588 ++ P L+PA++++YN+LV L + +KVS+P A + +++PPS F + P+L+FL KT S LM+N YP++ Y N + LD LF + VD L YTN+ DA +DA + +M ++ +DV V+VTE+GWPS GD Sbjct: 35 SSAPLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTW-HSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLFEPLTPSKEMVDPNTLLHYTNVLDAMVDAAYVSMKNLNVSDVAVLVTESGWPSKGD 183 HSP 2 Score: 23.0978 bits (48), Expect = 3.663e-26 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 3 Query: 630 HGNLVRRVLSGSGTPLRP 683 + NL++ V +GTPL P Sbjct: 198 NSNLIKHVFDRTGTPLHP 215
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 70/186 (37.63%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 22 LSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPS 579 L A+ S WV+AN+S + P +AV NEV +T ++PAM+NV +L S +KVS+ + N+ PPS+G L+P+L FL + + L+ N YP+FAY N I L +A F V+ NGL YTNLFDA +D+++AA+ VKVV++E+GWPS Sbjct: 83 LPSLASSPSAAAAWVKANVSSF-PGVSFRYIAVRNEVMDSAGQST--ILPAMRNVQRALAA--AGSPIKVSTSVRFDVFNNTSPPSNGVLADK--SGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATFVPGSTTVND-NGLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWPS 260
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23 Identity = 69/193 (35.75%), Postives = 104/193 (53.89%), Query Frame = 1 Query: 10 PNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSA-ISYNDVKVVVTETGWPSVG 585 PN +L+ A+D S WVQ+N+ + +AVGNEV T ++PAM+N+ +L L ++KVS+ + Q +PPS G+F + P+ ++L+ T + L+ N YP+F+Y N +I L YALF +PG V Y NLFDA +D +A+ +V VVV+E+GWPS G Sbjct: 84 PNTDLASLASDPSAAAAWVQSNVQASRRSA-CRYIAVGNEVSG---GDTGSILPAMQNLNAALANAGLGGSIKVSTAVQSDVTQG-FPPSQGTFSQGYMAPSR----QYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALF-TSPGTVVQDGSNAYQNLFDALVDTFVSALEENAGAGNVPVVVSESGWPSAG 266
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.872e-23 Identity = 67/203 (33.00%), Postives = 112/203 (55.17%), Query Frame = 1 Query: 1 VAFPNEELSKAAADQSFTDNWVQANISKYY--PATKIEAVAVGNEVFADPKNTT--PFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQN--SYP-PSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVGD 588 VA PN++L K +WV+ N+++Y I VAVGNE F N + PA+ N+ N+L + L ++VK + P+ + S P PS+G F+ D+I + +++FL K ++ + +N YPF + N D L+YA F + + + NG+ YTN+FDA D + +++ A+ + D+ ++V E GWP+ GD Sbjct: 76 VAIPNDQL-KVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDIIGQ-MTQIVDFLGKNNAPITINIYPFLSLYGN-DDFPLNYAFF--DGAEPINDNGIDYTNVFDANFDTLVSSLKAVGHGDMPIIVGEVGWPTEGD 273 HSP 2 Score: 20.7866 bits (42), Expect = 9.872e-23 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 3 Query: 630 HGNLVRRVLSGSGTPLRP 683 + L+ R+ + GTPLRP Sbjct: 285 YNGLLPRLGTNKGTPLRP 302
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21 Identity = 67/201 (33.33%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 1 VAFPNEELSKAAADQSFTDNWVQANISKYYPA---TKIEAVAVGNEVFADPKNTT--PFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGA-LQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVG 585 + N L A ++WV N+++Y+ +IE VAVG E F PF++ A N+ N+LVK L + VKV P + + L S PSSG F++DL + ++ +L FL K S V PF ++ N + ISLD++LF++ G Y N FD D + +A+ I +++V +VV++ GWP+ G Sbjct: 77 IGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAMNIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHFRADLNKTMIE-LLSFLTKHHSPFFVTISPFLSFHQNKN-ISLDFSLFKETAKAHKDGRKT-YRNSFDLSYDTLVSALFTIGFSEVDIVVSKIGWPTDG 274
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 64/203 (31.53%), Postives = 103/203 (50.74%), Query Frame = 1 Query: 1 VAFPNEELSKAAADQSFTDNWVQANISKYYPA--TKIEAVAVGNEVFADPKN----TTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYP-PSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVGD 588 V PNE L+ A+ + WV N+S + I VAVGNE F N +T F PA++N+ +++K L + VKV+ P+ +S PS G F+++ I + +++FL + VN YP+ + N D +DYA F N ++ G G Y N+FDA D + A+ + ++ +++ E GWP+ GD Sbjct: 73 VGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTF--PALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRAN-IRDLMITIVKFLSENGGPFTVNIYPYISLYTNPD-FPVDYAFFDGNAQPLNDG-GTFYYNMFDANYDTLVHALEKNGFGNMPIIIGEIGWPTDGD 270
BLAST of FC930611 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 59/201 (29.35%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 1 VAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEA--VAVGNEVFADPKNTT--PFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQN-SYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYTNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSVGD 588 V PN+ L+ A + + WV N+S + + ++ VAVGNE F N T +PA++N+ ++++K L + VKV+ P+ Q+ S PS G F+ ++ + L +++FL + +N YPF + N +++A F D G + NG Y N+ DA D + ++ + ++ ++V E GWP+ GD Sbjct: 78 VGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLN-IVKFLSDNGAPFTINIYPFISLY-NDPNFPVEFAFF-DGTGTPINDNGRIYDNVLDANYDTLVWSLQKNGFGNLTIIVGEVGWPTDGD 275 The following BLAST results are available for this feature:
BLAST of FC930611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930611 ID=FC930611; Name=FC930611; organism=Citrus clementina; type=EST; length=718bpback to top |