FC930721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M1_MOUSE (AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I ++ ++ + ++ FLHRV D F+ YF E E +++DN V+VYELL+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M1_HUMAN (AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I ++ ++ + ++ FLHRV D F+ YF E E +++DN V+VYELL+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M1_BOVIN (AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I ++ ++ + ++ FLHRV D F+ YF E E +++DN V+VYELL+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M1_CHICK (AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.112e-15 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + EK D ++ PV+ + I ++ ++ + ++ FLHRV D F+ YF E E +++DN V+VYELL+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAIDVENVPPVISTPLHYLISIYRDKIFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSETAIKDNVVIVYELLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP2M_SCHPO (AP-2 complex subunit mu OS=Schizosaccharomyces pombe GN=apm4 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15 Identity = 39/131 (29.77%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILS 686 +S LF+ ++KG L+ + +R D+ E F ++ + + P+V +Y++ +H ++Y++ ++ N N +L FL ++ HYF +L E +++DN ++ELLDEM+D+G Q TE + L+ Sbjct: 2 ISGLFIFNLKGDTLICKTFRHDLKKSVTEIFRVAILT---NTDYRHPIVSIGSSTYIYTKHEDLYVVAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKDNVSFIFELLDEMIDYGIIQTTEPDALA 129
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M1_RAT (AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15 Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + EK D ++ V+ + I ++ ++ + ++ FLHRV D F+ YF E E +++DN V+VYELL+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINCSGDIFLEKHWKSVVSQSVCDYFF-EAQEKAADVENVPTVISTPHHYLISIYRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M2_MOUSE (AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14 Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + E+ +A++ PV+ L + ++ + + ++ FLHRVVD F+ YF E ++DN VVVYE+L+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINSSGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M2_HUMAN (AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.050e-14 Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + E+ +A++ PV+ L + ++ + + ++ FLHRVVD F+ YF E ++DN VVVYE+L+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINSSGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKE 132
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M_DICDI (AP-3 complex subunit mu OS=Dictyostelium discoideum GN=apm3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14 Identity = 41/133 (30.83%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYF-EELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 +S+ F++ +G +L+ + +RG ++ E F+ ++++ + S P++ + IQ NVYL+ + + ++ FL R+ D F YF + ++++NFV VY+LLDEM D G+P TE N L E Sbjct: 2 LSSFFIIADQGDILIEKHWRGLMNRSICEYFWDQVLQSKQNGSSVPPIISTPKYYLINIQKQNVYLLGVCQSEVSPLLVVDFLQRIYDTFVEYFGSNITSATIKENFVHVYQLLDEMADNGFPFTTELNFLKE 134
BLAST of FC930721 vs. ExPASy Swiss-Prot
Match: AP3M2_RAT (AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14 Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 294 VSALFLLDIKGRVLVWRDYRGDVSAKQAERFFTKLIEKDGDAQSQDPVVYDNGVSYLFIQHSNVYLMTASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYTEANILSE 689 + +LFL++ G + + + ++ VS + FF + E+ +A++ PV+ L + ++ + + ++ FLHRVVD F+ YF E ++DN VVVYE+L+EM+D G+P TE+NIL E Sbjct: 2 IHSLFLINSAGDIFLEKHWKSVVSRSVCDYFF-EAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKE 132 The following BLAST results are available for this feature:
BLAST of FC930721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930721 ID=FC930721; Name=FC930721; organism=Citrus clementina; type=EST; length=739bpback to top |