FC930758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 463 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 S + S DVLA++S+EVDLS+I G TVTVKW+GKP+FI RT ++I A V + L DP++D RVK + WLV +G+CTH Sbjct: 40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTH 122
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRD-----------PQQDAERVKNP--EWLVVVGVCTH 705 ++R F Y+ G V A ++ M+ S DV A+AS++VD+S +E G+ +TVKW GKPVFIRRRTE++I+ VDLG L D P D R + EWLV++GVCTH Sbjct: 14 TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTH 134
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 51/100 (51.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 466 MSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNP--------------------EWLVVVGVCTH 705 M+AS DV AMAS+ VD+S++E G+ +TVKWRGKPVFIRRR E+DI+LA +V LG+LRD AE P EWLV++GVCTH Sbjct: 38 MNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRD--TSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTH 135
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 463 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A V + L DP+ D RVK + WLV +G+CTH Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTH 122
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 463 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A V + L DP+ D RVK + WLV +G+CTH Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTH 122
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 373 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRD--------------PQQDAERVKNPEWLVVVGVCTH 705 ++R F Y+ G V + + M+ S DV A+AS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L +V LG L D Q+ + EWLV+ GVCTH Sbjct: 10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTH 131
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15 Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 370 PSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 P++R F FV TG L F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A V++ SL DPQ D RVK + +WLVV+G+CTH Sbjct: 10 PTRRDFL-FVATGAAAAVGGAAALW--PFISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTH 121
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 367 DPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVK--NPEWLVVVGVCTH 705 + ++R F Y V A+ + + F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++I+ D+G+L DPQ D+ RVK EWLVV CTH Sbjct: 8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTH 120 The following BLAST results are available for this feature:
BLAST of FC930758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930758 ID=FC930758; Name=FC930758; organism=Citrus clementina; type=EST; length=705bpback to top |