FC930760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSF (ATP-dependent Clp protease proteolytic subunit OS=Geobacter sp. (strain FRC-32) GN=clpP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI++LG + +V+ L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CV Sbjct: 18 DIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHLYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICV 92
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_PELPD (ATP-dependent Clp protease proteolytic subunit OS=Pelobacter propionicus (strain DSM 2379) GN=clpP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K RI++LG V LI+A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CV Sbjct: 18 DIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHLYINSPG--------GVVTSGMAIYDTMRYIKAPVSTICV 92
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSM (ATP-dependent Clp protease proteolytic subunit OS=Geobacter sp. (strain M21) GN=clpP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CV Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICV 92
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_GEOBB (ATP-dependent Clp protease proteolytic subunit OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=clpP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI++LG +V L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+K P+ T+CV Sbjct: 18 DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHLYINSPG--------GVVTAGMAIYDTMRYIKAPVSTICV 92
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_DESRM (ATP-dependent Clp protease proteolytic subunit OS=Desulfotomaculum reducens (strain MI-1) GN=clpP PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI+++G + L++A+FL+L+ ED EK I+LYINS G G T AIYD M Y+KP + T+C+ Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPG--------GVVTAGLAIYDTMQYIKPAVSTICL 94
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_SYNAS (ATP-dependent Clp protease proteolytic subunit OS=Syntrophus aciditrophicus (strain SB) GN=clpP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI++LG V LI+A+ L+L+ ED +K I+ Y+N+ G G+ + AIYD M Y+KPP+ T+CV Sbjct: 19 DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPG--------GHISSGMAIYDTMRYIKPPVATVCV 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_FUSNN (ATP-dependent Clp protease proteolytic subunit OS=Fusobacterium nucleatum subsp. nucleatum GN=clpP PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RI+++G + +V I+A+ LYL+ ED EK I +YINS G G T+ AIYD M Y+KP + T+CV Sbjct: 18 DIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPG--------GSVTDGMAIYDTMNYIKPDVQTVCV 92
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 270 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 P + +P +S W D+ + L RI++LG + I+A+ LYL ED+ KPIYLYINS G G T AIYD M Y+K P+ T+C+ Sbjct: 6 PSVPYRLPGSSFERWI----DIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG--------GSVTAGMAIYDTMQYIKSPVITICL 96
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 270 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 P + +P +S W D+ + L RI++LG + I+A+ LYL ED+ KPIYLYINS G G T AIYD M Y+K P+ T+C+ Sbjct: 6 PSVPYRLPGSSFERWI----DIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG--------GSVTAGMAIYDTMQYIKSPVITICL 96
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_THETN (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter tengcongensis GN=clpP PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.058e-11 Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG + L++A+ L+L+ ED +K I+LYINS G G T AIYD M Y+KP + TLCV Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPG--------GSITAGLAIYDTMQYIKPDVVTLCV 93 The following BLAST results are available for this feature:
BLAST of FC930760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930760 ID=FC930760; Name=FC930760; organism=Citrus clementina; type=EST; length=629bpback to top |