FC930760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_LEPIN (ATP-dependent Clp protease proteolytic subunit OS=Leptospira interrogans GN=clpP PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 285 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYLY+NS G GY + AIYD M Y+KP + TLC+ Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYLYLNSPG--------GYVSSGLAIYDTMQYIKPDVRTLCL 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_CAMHC (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=clpP PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV L V ++A+ L+L+ ED +K IYLYINS G G T F+IYD M Y+KP + T+C+ Sbjct: 18 DIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPG--------GVVTSGFSIYDTMNYIKPAVSTICI 92
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP1_LEPIC (ATP-dependent Clp protease proteolytic subunit 1 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=clpP1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 285 VIPFT-SGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 VIP+ T+ + D+ S L K+RI++LG + +I A+ L+L+ E+ E+ IYLY+NS G GY + AIYD M Y+KP + TLC+ Sbjct: 3 VIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDIYLYLNSPG--------GYVSSGLAIYDTMQYIKPDVRTLCL 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G T AIYD M Y+K + T+CV Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICV 102
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G T AIYD M Y+K + T+CV Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICV 102
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG V L++A+ L+L+ ED +K +YLYINS G G T AIYD M Y+K + T+CV Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG--------GSVTAGLAIYDTMQYIKCDVSTICV 102
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_HALOH (ATP-dependent Clp protease proteolytic subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=clpP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG ++ LI+A+ L+L+ ED +K I+LYINS G G T A A+YD + Y+KP + T+C+ Sbjct: 19 DIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPG--------GSVTAALAMYDTIQYIKPDVATICM 93
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP_ANADF (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain Fw109-5) GN=clpP PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 D+ S L K+RIV+LG V +++A+ L+L+ ED +K I LYINS G G T AIYD M YVKP + T+C+ Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPG--------GSVTSGLAIYDTMQYVKPQVSTICL 95
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 270 PVITMVIPFTSGTAWEQPPPDLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLCV 578 P+ T +P+ + + D+ + L RI++LG V ++A+ LYL ED+ KPIYLYINS G G T AIYD M YVK + T+CV Sbjct: 2 PIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GSVTAGLAIYDTMKYVKSDVVTICV 96
BLAST of FC930760 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHD (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus halodurans GN=clpP2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 3 Query: 330 DLASYLYKNRIVYLGMSFVPSVTELILAEFLYLQYEDAEKPIYLYINSTGTTKGVEKLGYETEAFAIYDVMGYVKPPIFTLC 575 D+ S L K+RIV+LG + + I+A+ L+L+ E+ +K IYLYINS G G + FAIYD M +VKP I T+C Sbjct: 20 DIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG--------GSTSAGFAIYDTMQFVKPSIHTIC 93 The following BLAST results are available for this feature:
BLAST of FC930760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930760 ID=FC930760; Name=FC930760; organism=Citrus clementina; type=EST; length=629bpback to top |