FC930762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_ALHEH (Methylthioribose-1-phosphate isomerase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.055e-31 Identity = 88/221 (39.82%), Postives = 127/221 (57.47%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIML-KDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 ++++++ ++ L+LLDQR+LP ET++L+ +AD AIR+MVVRG V + A + AD + + L L S+RPTAVNL A ++++++ A A +EAA + + +DD+ N+ +G GA + + VLTHCNTGSLAT GYGTALGVIR+ S L Y ETRP+ QG+RLTA+ELV D IP Sbjct: 5 DTVRALDWQGDHLKLLDQRRLPAETVWLDCHSAADTADAIRDMVVRGAPAIGIAAAYG--VVLAARAAMARRPADWPAAMAADLARLRSARPTAVNLFWALDRMQQVVDSDPADPLAA-------LEAAAVAIHEDDLTANRRMGELGAHLIP-----AGAGVLTHCNTGSLATGGYGTALGVIRSAWSGKGLSAVYADETRPWLQGARLTAWELVADGIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PSEAE (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa GN=mtnA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 87/219 (39.73%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L + L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R Y ETRP+ QGSRLTA+EL ++ IP Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEGIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PSEAB (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=mtnA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 87/219 (39.73%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L + L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R Y ETRP+ QGSRLTA+EL ++ IP Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEGIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PSEA8 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=mtnA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.602e-31 Identity = 87/219 (39.73%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L + L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R Y ETRP+ QGSRLTA+EL ++ IP Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQGSRLTAWELANEGIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PSEA7 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain PA7) GN=mtnA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30 Identity = 87/219 (39.73%), Postives = 125/219 (57.08%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++I +R G+L+LLDQR LP E ++L+ +A+ AIR+MVVRG V A D + L + L SRPTAVNL A +++E + + E + A +EA I + D D N + G ++ Q ++S ++LTHCNTG+LAT G+GTALGVIRA H EG++ R + ETRP+ QGSRLTA+EL ++ IP Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLDHGSAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLARGGDWRTALEEDFRLLADSRPTAVNLFWALNRMRERLERM----KEGDRPL-AVLEAEAISIHDSDREANLTMAQLGMELIRKQ-QSSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIHADETRPWLQGSRLTAWELANEGIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_HAHCH (Methylthioribose-1-phosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=mtnA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30 Identity = 86/226 (38.05%), Postives = 122/226 (53.98%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDK------LEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +S+ +I + L LLDQRKLPL+ Y+ + AIR+MVVRG + A G A AA F D+ LE L SRPTAVNL A +++ +I A+ +F +E A + ++D+ N +G GA + ++ + ++LTHCNTGSLAT GYGTALGVIR+ + ++ + ETRP+ QG+RLTA+EL D IP Sbjct: 4 SSVSAIRWANNQLILLDQRKLPLQEAYVNCVTHVEVADAIRQMVVRG-------------APAIGIAAAYGVALAAAEFGSDRDRLHRALETLADSRPTAVNLFWALRRMRGLIDGASVA-----DLFPLLVEEATRIHEEDLQANLTMGELGADLIA---ESGRGALLTHCNTGSLATGGYGTALGVIRSAYRRDLVTEVFADETRPWLQGARLTAWELCQDDIP 208
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_CHLTE (Methylthioribose-1-phosphate isomerase OS=Chlorobium tepidum GN=mtnA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.921e-30 Identity = 80/222 (36.04%), Postives = 120/222 (54.05%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQ----LKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 + +I ++ G+ + LDQR LPL+ I++E ++ + AI+ + VRG V +N ++G A + + + + +SRPTAVNL A K++E+ A ++F + A + D++ I +G L+ LK K +VLTHCNTG+LA G GTALGVIR + EG++ER SE+RP QG RLTA+EL HD IP Sbjct: 2 IDAISFKNGTFRYLDQRFLPLQEIHVETKNHQEAIEAIKTLAVRGAPLIGASAGYTV---VLGINEYTGDKAGFPEYFKNLIAEVNASRPTAVNLFFATKKMQEVYD-ANFENDSLEALFAKMTDMAYKIHNDEIDNCDKIARHGVELLKQDFADVLKTRKLNVLTHCNTGTLACCGIGTALGVIRLAYQEGLIERVITSESRPLLQGLRLTAWELEHDGIP 219
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XYLFA (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa GN=mtnA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.509e-30 Identity = 84/207 (40.58%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 37 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 L+LLDQRKLP Y+E S D AIR ++VRG + + A G +A L L+ L ++RPTAVNL+ A+++ +S A A QA AE + ++D+ N+ +G+YGA+ + VLTHCNTGSLATAG+GTALGVIRA ++G + R + ETRP+ QG+RLT +EL D I Sbjct: 25 LKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLAAREIEAVDGI--EALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWR------QAMAREAESIAREDLTANRCMGAYGAALIP-----IGSGVLTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGETRPWLQGARLTVWELQQDGI 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_METCA (Methylthioribose-1-phosphate isomerase OS=Methylococcus capsulatus GN=mtnA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.509e-30 Identity = 94/224 (41.96%), Postives = 128/224 (57.14%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWS-AIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASF---LGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++Q++ + G L++LDQR LP + +Y +I D+A G + AI M VRG L A + A D A + + D + L SRPTAVNL A +++E A A E + V A + AA + +DD+A N A+G GA+ L VLTHCNTG+LAT GYGTALGVIR+ G LER Y +ETRP++QG+RLT +EL DRIP Sbjct: 10 SAVQALKWSDGGLEVLDQRLLPGDVVY-QIFDTAAGVAEAIASMRVRGAPAIGIAAAYGVV-----LGARAAYARDPAHWKRAVEDDIAVLARSRPTAVNLFWALERMRE-----AMAAIEGDPV-PALLAAARRIHEDDLAANLAMGELGAAIL-----GGCKGVLTHCNTGALATGGYGTALGVIRSTWRRGALERVYATETRPWSQGARLTVWELGQDRIP 216
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XYLFM (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa (strain M12) GN=mtnA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 82/207 (39.61%), Postives = 115/207 (55.56%), Query Frame = 1 Query: 37 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 L+LLDQRKLP Y+E S D AIR ++VRG + + A G +A L L+ L ++RPTAVNL+ A+++ +S A A + AE + ++D+ N+ +G+YGA+ + VLTHCNTGSLATAG+GTALGVIRA ++G + R + ETRP+ QG+RLT +EL D I Sbjct: 25 LKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLAAREIEAVDGI--EALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMEC------EAESIAREDITANRCMGAYGAALIP-----IGSGVLTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGETRPWLQGARLTVWELQQDGI 218 The following BLAST results are available for this feature:
BLAST of FC930762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930762 ID=FC930762; Name=FC930762; organism=Citrus clementina; type=EST; length=772bpback to top |