FC930762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_FERNB (Methylthioribose-1-phosphate isomerase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=mtnA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 6.690e-27 Identity = 77/206 (37.38%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 34 SLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHD 651 SL L+DQR+LP E +Y+ D +I+EMVVRG + + S + + E L +RPTAVNL A +++ K + + + + A + K+D+ NKAIG GA LQ+ F+VLTHCN G+LAT YGTALGV+RA +G + Y ETRP+ QG+RLTA+EL+ D Sbjct: 14 SLILIDQRRLPFEEVYVTCADYRAVALSIKEMVVRGAPAIGATAAFGYVLGAKEILKKSHNYEQVVMQMKNVKETLAKTRPTAVNLFWALERME----KRLIRHGKYEGLVKVLEDEALKIAKEDIEVNKAIGRNGAQLLQDG-----FTVLTHCNAGALATVDYGTALGVLRAAKEQGKKIKVYADETRPYLQGARLTAWELMKD 210 HSP 2 Score: 21.1718 bits (43), Expect = 6.690e-27 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 687 GCIDEDGRVSAVIVGA 734 G + + G+++AVIVGA Sbjct: 223 GWVMKQGKINAVIVGA 238
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_LEPBP (Methylthioribose-1-phosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.554e-27 Identity = 82/208 (39.42%), Postives = 113/208 (54.33%), Query Frame = 1 Query: 37 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 L LLDQR LP + +L+I+ + AIREM VRG L A + + ++ + SRPTAVNLS A + K K S +S+ + + A M+ D+ N+ +G GA F +NQ ++F ++THCNTG+LATAG+GTALGVIR+L +G Y ETRPF QGSRLTAFE++ + I Sbjct: 16 LSLLDQRVLPGKKEFLQIQTMEETIVAIREMAVRGAPAIAITGIFG-----ITLGAKKKSGNSNPVDVDSLIKQVFESRPTAVNLSFALKEAK----KRVEGVSHWDSIAKVWESYALEMMVQDLKANQTLGKNGADLFPKNQ---NEFHIITHCNTGALATAGHGTALGVIRSLRDQGKKVVVYADETRPFLQGSRLTAFEMMEEGI 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_LEPBA (Methylthioribose-1-phosphate isomerase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.554e-27 Identity = 82/208 (39.42%), Postives = 113/208 (54.33%), Query Frame = 1 Query: 37 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 L LLDQR LP + +L+I+ + AIREM VRG L A + + ++ + SRPTAVNLS A + K K S +S+ + + A M+ D+ N+ +G GA F +NQ ++F ++THCNTG+LATAG+GTALGVIR+L +G Y ETRPF QGSRLTAFE++ + I Sbjct: 16 LSLLDQRVLPGKKEFLQIQTMEETIVAIREMAVRGAPAIAITGIFG-----ITLGAKKKSGNSNPVDVDSLIKQVFESRPTAVNLSFALKEAK----KRVEGVSHWDSIAKVWESYALEMMVQDLKANQTLGKNGADLFPKNQ---NEFHIITHCNTGALATAGHGTALGVIRSLRDQGKKVVVYADETRPFLQGSRLTAFEMMEEGI 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_GEOMG (Methylthioribose-1-phosphate isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.554e-27 Identity = 86/231 (37.23%), Postives = 117/231 (50.65%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLE-----------YLVSSRPTAVNLSDAAAKLKEIIS-KAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 S ++I +R + ++DQ +LP E +Y E D AIR M++RG + A G A A + D E L +RPTAVNL A ++K + + + E V +A EA I ++D+A KAIG +GA + +VLTHCN G LATAGYGTALGVIRA H G + + ETRP+ QG+RLTA+EL+ D IP Sbjct: 2 SFRTIEWRDDKVIMIDQTRLPGEEVYCEYGDYKSVAEAIRGMIIRG-------------APAIGVAAAMGVALGAREIIADTHESFLRQLDNVCDVLARTRPTAVNLFWAIERMKRVAADNCGGSLDEVREVLKA--EAIRIE-EEDLALCKAIGRHGAGLIPEGA-----TVLTHCNAGGLATAGYGTALGVIRAAHEAGKNIQVFADETRPWLQGARLTAWELMKDGIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_DESHY (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain Y51) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.865e-27 Identity = 77/209 (36.84%), Postives = 110/209 (52.63%), Query Frame = 1 Query: 34 SLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 SL++LDQ +LP+E Y + AI +M VRG + +SG A ++ + L +RPTAVNL A ++++ + + A E + QA + AE + +DD N+ IG +G N + ++ ++LTHCN G+LAT YGTALGVIRA G Y ETRPF QG+RLTA EL++D IP Sbjct: 10 SLKILDQTRLPVEIKYRMAATYEEVAEAIEKMEVRGAPAIGAAAAYGYALGAIG---YSGELAGLSAHMEKVQHRLAETRPTAVNLFWALRRMEDRL-RDQHEAKELAEIRQALVAEAESIAEDDRRVNRLIGEHG-----NAIVTAEANILTHCNAGALATVEYGTALGVIRAAQQAGKKVHVYAGETRPFLQGARLTALELMNDHIP 209
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_SOLUE (Methylthioribose-1-phosphate isomerase OS=Solibacter usitatus (strain Ellin6076) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.288e-26 Identity = 79/218 (36.24%), Postives = 116/218 (53.21%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++I + G + ++DQ +LPL Y+ R+ + +AIR+M++RG + V +A G + E L +RPTAVNL A ++K + E + I A+I+ ++D+A N+AIG GA+ + + +VLTHCN G+LATAGYGTALGVIRA G + ETRPF QG+RLT +EL D IP Sbjct: 2 VETIEWTPGGVVMIDQTRLPLHEEYVTCRNYEEVATAIRDMIIRGAPAIGVAAAMGVAIGV--QHAGDGDLDGQVDLI---CETLAKTRPTAVNLFWAIDRMKRLYGSMRGRPLE--EIRSRLIAEAQIVREEDIAINRAIGRNGAALVPDGK-----TVLTHCNAGALATAGYGTALGVIRAAIESGKKIDVFADETRPFLQGARLTVWELQQDSIP 207
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_AZOVD (Methylthioribose-1-phosphate isomerase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=mtnA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.288e-26 Identity = 84/219 (38.36%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWS-AIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 +++I +R G+L LLDQR LP E +L DSA G + AIR+MVVRG + A G D + L + L SRPTAVNL A +++E +++ + A A + + D N + G ++ S ++LTHCNTG+LAT G+GTALGVIRA EG+++R Y ETRP+ QG+RLTA+EL + IP Sbjct: 11 IKAIEWRDGTLHLLDQRLLPQEERWLSY-DSASGVAGAIRDMVVRGAPAIGISAAYGVLLGARRRLAAGG---DWRAALEEDFRVLAESRPTAVNLFWALDRMRERLARL----KDGEDALVALEAEAVGIHESDREANLTMAQLGLELIRKH-SGSPQALLTHCNTGALATGGFGTALGVIRAAWLEGLVDRVYADETRPWLQGARLTAWELAEEGIP 220
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_LEPBL (Methylthioribose-1-phosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mtnA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26 Identity = 81/220 (36.82%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 + L+ I + L LLDQR LP T YL+ + D AIREMVVRG + + L++ S L KL+ L+ SRPTAVNL + +A +++ + ++ E A ML++D+ N + S S +++THCNTG+LATAG+GTALGVIR+L G + ETRP+ QG+RLTA+EL + IP Sbjct: 4 SGLKPILWTNKELILLDQRVLPGTTSYLKAKTLEDCIFAIREMVVRGAPAIAITGAFGIALYLNGLSS-----QPTFSQLKTKLDELLESRPTAVNLRLVIEEFFSRFPEADYSSANLEKMQKSAEEFALFMLEEDLENNLTLSKNALSLFPKS--PSSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGARLTAWELKEEGIP 216
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_LEPBJ (Methylthioribose-1-phosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mtnA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.683e-26 Identity = 81/220 (36.82%), Postives = 115/220 (52.27%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 + L+ I + L LLDQR LP T YL+ + D AIREMVVRG + + L++ S L KL+ L+ SRPTAVNL + +A +++ + ++ E A ML++D+ N + S S +++THCNTG+LATAG+GTALGVIR+L G + ETRP+ QG+RLTA+EL + IP Sbjct: 4 SGLKPILWTNKELILLDQRVLPGTTSYLKAKTLEDCIFAIREMVVRGAPAIAITGAFGIALYLNGLSS-----QPTFSQLKTKLDELLESRPTAVNLRLVIEEFFSRFPEADYSSANLEKMQKSAEEFALFMLEEDLENNLTLSKNALSLFPKS--PSSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGARLTAWELKEEGIP 216
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PELTS (Methylthioribose-1-phosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mtnA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.870e-26 Identity = 71/210 (33.81%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 31 GSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 G L+LLDQ +LP E Y++ + D AI+ + VRG + + A T + + L + L ++RPTAVNL A ++ + A +A + +E A+ + ++D+ N+ + YG + + +LTHCN G+LATAGYGTALG++RA H G Y ETRP QG+RLTA+E++ + IP Sbjct: 11 GLLELLDQTRLPFEKSYIKCTEYTDVAEAIKRLAVRGAPAIGAAAAYGLVLAARKIRA--NTKKEFLTELEARARELAATRPTAVNLHWALNRM--LRKMRLAEPEDAGLLCDLLLEEAQAIFREDITGNRRMARYGLELIPEGAR-----ILTHCNAGALATAGYGTALGLVRAAHEAGRRVSVYAGETRPLLQGARLTAWEMLQEGIP 211 The following BLAST results are available for this feature:
BLAST of FC930762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930762 ID=FC930762; Name=FC930762; organism=Citrus clementina; type=EST; length=772bpback to top |