FC930762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PELPD (Methylthioribose-1-phosphate isomerase OS=Pelobacter propionicus (strain DSM 2379) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.206e-24 Identity = 81/230 (35.22%), Postives = 114/230 (49.57%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLE-----------YLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 S ++I +R S+ ++DQ +LP E +Y D AIR MV+RG + A G A A + D E + +RPTAVNL A ++K + A + + Q E A + ++D+ + IG +GA+ + +VLTHCN G LATAGYGTALGVIRA H G + + ETRP+ QG+RLTA+ELV + IP Sbjct: 2 SFRTIEWRDDSVIMIDQTRLPGEEVYNTYTDFKAVAEAIRGMVIRG-------------APAIGVAAAMGIALGARDIIADTHESFFRQLENVCDVMARTRPTAVNLFWAIERMKRVAE--AGRDKPLDGIRQLLKEEAIRVEEEDLTICRNIGKWGATLIPEGA-----TVLTHCNAGGLATAGYGTALGVIRAAHEAGKKIQVFADETRPWLQGARLTAWELVKEGIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_GEOUR (Methylthioribose-1-phosphate isomerase OS=Geobacter uraniireducens (strain Rf4) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.206e-24 Identity = 78/230 (33.91%), Postives = 115/230 (50.00%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLE-----------YLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 S ++I +R + ++DQ +LP E +Y E D AIR M++RG + A G A A + D E + +RPTAVNL A ++K + + + NS+ + A + ++D+ +AIG GA ++ ++LTHCN G LATAGYGTALGVIRA H G + + ETRP+ QG+RLT++EL+ D IP Sbjct: 2 SFRTIEWRDNKVVMIDQTRLPGEEVYNEYTDFQSVAEAIRGMIIRG-------------APAIGVAAAMGIALGAREIIADTHESFFRQLDNVCNVMARTRPTAVNLFWAIERMKRVAE--SHRDKDLNSIREILKAEAIRIEEEDLEICRAIGRNGAPLIKEGA-----TILTHCNAGGLATAGYGTALGVIRAAHEAGKRIQVFADETRPWLQGARLTSWELMKDGIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_GEOSF (Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain FRC-32) GN=mtnA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.206e-24 Identity = 80/231 (34.63%), Postives = 115/231 (49.78%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLE-----------YLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 S ++I +R + ++DQ +LP E +Y D AIR M++RG + A G A A + D E L +RPTAVNL A ++K + A + + ++A I +++ D+ +AIG +GA ++ +VLTHCN G LATAGYGTALGVIRA H G + + ETRP+ QG+RLTA+EL+ D IP Sbjct: 2 SFRTIEWRDNKVVMIDQTRLPGEEVYNVYEDFQSVAEAIRGMIIRG-------------APAIGVAAAMGVALGAREIIADTYESFSRQLTNVCDVLARTRPTAVNLFWAIERMKRV---AESNKDRDLHFIRETLKAEAIRIEEEDLEICRAIGRHGAPLIREGA-----TVLTHCNAGGLATAGYGTALGVIRAAHEAGKNIQVFADETRPWLQGARLTAWELMKDGIP 211
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_DESDG (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio desulfuricans (strain G20) GN=mtnA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.695e-24 Identity = 78/213 (36.62%), Postives = 112/213 (52.58%), Query Frame = 1 Query: 34 SLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASF---LGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLE-RAYCSETRPFNQGSRLTAFELVHDRIP 660 +L LLDQR LP D AD A++ MVVRG + + +G A A + L LE L +RPTAVNL A +++ + + N++ +++ AE + ++D + N+AIG +GA+ +Q+ ++THCN G+LATAGYGTALGV+R G +ETRPF QG+RLTA+EL D IP Sbjct: 13 TLILLDQRVLPTVEEDFYCNDVADTIYALQTMVVRGAPAIGVTAAYGCCLAAYE----AGHPAPHAQWQKELDTLLEKLAQARPTAVNLRWAVERMRSVWKSMGDP--DLNTLIARWLDEAEAIHEEDKSINRAIGRHGATLIQDN-----DCIMTHCNAGALATAGYGTALGVVRGAVDAGRTGITVIANETRPFLQGARLTAYELHKDGIP 214 HSP 2 Score: 20.7866 bits (42), Expect = 1.695e-24 Identity = 8/17 (47.06%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 684 CGCIDEDGRVSAVIVGA 734 CG + + G V V+VGA Sbjct: 223 CGLLMQRGMVQKVVVGA 239
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_SYNP2 (Methylthioribose-1-phosphate isomerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=mtnA PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.696e-24 Identity = 82/224 (36.61%), Postives = 113/224 (50.45%), Query Frame = 1 Query: 1 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSS----RPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 NS+ I ++ + L+DQ LPL +EI+ AIR M+VRG L A D FL +KLE + ++ RPTAVNL A ++ + A E ++ + A+ + +D+AT +AIG G + L + K ++LTHCN G LATAGYGTALGVIR+ E L Y ETRP QGS+LT +E V + IP Sbjct: 3 NSINPIVWQEDCVLLVDQTLLPLAYKVVEIKTYQAMAEAIRTMIVRGAPAIGVSAAYGLY-----LGAKEIQTTDRTIFL-EKLEAIAATLRQTRPTAVNLFWAIDRVMATVQGATGNIPELQNLI---LNTAKAIHNEDLATCQAIGDQGLAVLPETPE--KLTILTHCNAGGLATAGYGTALGVIRSAWRENRLGMVYADETRPRLQGSKLTTWECVQEGIP 215 HSP 2 Score: 20.4014 bits (41), Expect = 1.696e-24 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 3 Query: 699 EDGRVSAVIVGA 734 + GR+ AV+VGA Sbjct: 229 QQGRIDAVVVGA 240
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_SYNAS (Methylthioribose-1-phosphate isomerase OS=Syntrophus aciditrophicus (strain SB) GN=mtnA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.057e-24 Identity = 83/235 (35.32%), Postives = 118/235 (50.21%), Query Frame = 1 Query: 4 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTA-ADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKA--AATASEANS-------------VFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 S +I +R ++ LLDQ+ LP E YL + +AIR++ VRG + +L S A + L D+ +RPTA NL A ++K + T+SE +S V +A + A M ++DVA N+ IG YG +++ + +LTHCN G+LATAGYGTALGVIRA G + + ETRP QG+RLTA+EL + IP Sbjct: 4 SFTTIAWRNDAVLLLDQQALPGEERYLTCTRFEEVLTAIRDLTVRGAPAIGVASAMGIALGALSLPDDSPEAFCNGFEALCDRF---AQARPTARNLFWAVERMKRCFGEHFHPDTSSECSSAAPGKEIARTLAAVRKALVAEARRMAEEDVAINRRIGHYGQVLIRDG-----YRILTHCNAGALATAGYGTALGVIRAAREAGKQVQVFADETRPVLQGARLTAWELQKENIP 230
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_TRIEI (Methylthioribose-1-phosphate isomerase OS=Trichodesmium erythraeum (strain IMS101) GN=mtnA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.509e-24 Identity = 79/218 (36.24%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 16 ICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLV---SSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 I ++ + L+DQ LP E +EI + AI+ M+VRG L A D FL E V +RPTAVNL A ++ ++ +K T E + +A +E A+ + ++D+ T K IG L K K ++LTHCN G+LATAGYGTALGVIR+ +G L + Y ETRP QG++LT +E V + IP Sbjct: 11 ITWKNDHVVLIDQTCLPEEYKTVEISSYEEMAVAIKTMIVRGAPAIGVSVAYGMY-----LGARETVTNDRNEFLKQLEEIAVIFRRTRPTAVNLFWAIERILKVANKTNGTVKE---IQEAVLETAKKIHQEDLETCKNIGDRAVEILPT--KPEKLNILTHCNAGALATAGYGTALGVIRSAWRDGRLGKVYADETRPRLQGAKLTTWECVQENIP 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_PERMH (Methylthioribose-1-phosphate isomerase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=mtnA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.583e-24 Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 1 Query: 37 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRIP 660 L +++Q KLP E +LE+ AI +M++RG + V + G + D + D+L+ ++RPTAVNL A ++ + + + + AE + +D NKAIG YG L + +VLTHCNTG+LAT+G+GTALGVIR+ G Y ETRP+ QGSRLTA+ELV + IP Sbjct: 17 LYVINQLKLPKEKEWLELSTYQQVAEAIEKMIIRGAPLIGIVGAYGFAIGVKQI-LDEGRSLDDVRDVFDRLK---NTRPTAVNLFWALERVWKKFERWTEEGRSGEELVNLLFKEAERIDLEDYHANKAIGGYGQVLLPERC-----NVLTHCNTGALATSGWGTALGVIRSAFENGKDITVYVDETRPYLQGSRLTAWELVEEGIP 215
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XANOR (Methylthioribose-1-phosphate isomerase OS=Xanthomonas oryzae pv. oryzae GN=mtnA PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYI-EAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 ++ + + +L+LLDQRKLP ++ S AI + VRG + ++ A G AA L L L ++RPTAVNL+ A +++ ++ A A ++A I A+ + +D+A N+ +G+ GA+ + VLTHCNTGSLATAG+GTALGVIRA ++ + + + ETRP+ QG+RLT +EL D I Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDTSDAVAEAIHSLAVRGAPAIGIAAGWGVALAARDIAADDGNAA--LQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGAD-------WRAVIAREAQAIADEDLAANRHMGALGAALIA-----PGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQGARLTVWELQQDGI 218
BLAST of FC930762 vs. ExPASy Swiss-Prot
Match: MTNA_XANOP (Methylthioribose-1-phosphate isomerase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mtnA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 77/218 (35.32%), Postives = 117/218 (53.67%), Query Frame = 1 Query: 7 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYI-EAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALHSEGVLERAYCSETRPFNQGSRLTAFELVHDRI 657 ++ + + +L+LLDQRKLP ++ S AI + VRG + ++ A G AA L L L ++RPTAVNL+ A +++ ++ A A ++A I A+ + +D+A N+ +G+ GA+ + VLTHCNTGSLATAG+GTALGVIRA ++ + + + ETRP+ QG+RLT +EL D I Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDTSDAVAEAIHSLAVRGAPAIGIAAGWGVALAARDIAADDGNAA--LQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGAD-------WRAVIAREAQAIADEDLAANRHMGALGAALIA-----PGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQGARLTVWELQQDGI 218 The following BLAST results are available for this feature:
BLAST of FC930762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930762 ID=FC930762; Name=FC930762; organism=Citrus clementina; type=EST; length=772bpback to top |