FC930764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25 Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANIRVPRRVAHT 697 A YVG+LDP VTE++L++ F AGP+ + +D VT GYG+V FR DA++A+ +N + GKP R+ + D + G N+FI NLD +D + L+ FSAFG I++ + D S+G+ ++ +DS A++ AI MNG L NRQ+ V R P ER AA +R R T Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC---DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG----------RFKFPEER--AAEVRTRDRATFT 199 HSP 2 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 52/185 (28.11%), Postives = 95/185 (51.35%), Query Frame = 2 Query: 95 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-----------------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 598 +R +V N+ + +E L ELF + GP +V V +D + +G+GFV + + E A A+ L+ + GK + V +A + +KS G ++I NLD ++++ L + FS+FG I + K+M + G +GFG + + SFE + A++ MNG+ + ++ + V+ Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI-SRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVT 374 HSP 3 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 48/173 (27.75%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + L+ LF G +++ V D N +GY +V F S A+ AI +N ++L + + V + ++++ +V N+F+ N+ D+D++ L + F +G + K++RD +G S+GFGF+ Y++ EA+ A+ ++G+ + + + V A KK Sbjct: 109 FIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKK 277
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25 Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANIRVPRRVAHT 697 A YVG+LDP VTE++L++ F AGP+ + +D VT GYG+V FR DA++A+ +N + GKP R+ + D + G N+FI NLD +D + L+ FSAFG I++ + D S+G+ ++ +DS A++ AI MNG L NRQ+ V R P ER AA +R R T Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC---DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVG----------RFKFPEER--AAEVRTRDRATFT 199 HSP 2 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 52/185 (28.11%), Postives = 95/185 (51.35%), Query Frame = 2 Query: 95 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-----------------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 598 +R +V N+ + +E L ELF + GP +V V +D + +G+GFV + + E A A+ L+ + GK + V +A + +KS G ++I NLD ++++ L + FS+FG I + K+M + G +GFG + + SFE + A++ MNG+ + ++ + V+ Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI-SRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVT 374 HSP 3 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 48/173 (27.75%), Postives = 93/173 (53.76%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 ++ NLD + L+ LF G +++ V D N +GY +V F S A+ AI +N ++L + + V + ++++ +V N+F+ N+ D+D++ L + F +G + K++RD +G S+GFGF+ Y++ EA+ A+ ++G+ + + + V A KK Sbjct: 109 FIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKK 277
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.727e-25 Identity = 65/190 (34.21%), Postives = 112/190 (58.95%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPAERILAANIR 673 A+ YVG+L P+VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++ LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++ D +G+GF+ + E+++ AI+ MNG +L R+I V + K+ + ER G A + +A+++ Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVAC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER-GAWARQSTSADVK 187
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 67/183 (36.61%), Postives = 110/183 (60.11%), Query Frame = 2 Query: 56 PGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 601 P VG N +++A+ + + YVG LDP VTE +L+E+F G V ++ V +D VT GY +V F + D + A++ LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ + +TG S G+GF+ Y++ EA++AAI+ +NG L ++++ V + Sbjct: 30 PAVG-NGEQRNNADAANNTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCK--VATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGH 208 HSP 2 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 58/188 (30.85%), Postives = 100/188 (53.19%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 631 Y N+DP+VT++ +LF + G + + + +D +G+GFV F +A A+ L+ G+ + V +A + +K + G NL++ N+ D++ L + F+ FG I T+ KIMR P +G SRGFGF+ Y + E ++ A+ MNG+ L NR + V+ A +KD + ++ Sbjct: 230 YAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDE-DGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAI-TSCKIMRAP-SGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQ 414 HSP 3 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 50/184 (27.17%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 98 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 628 R ++ NLD + + L + F G +++ V + +L GYGFV + + E A+ AIK +N + L K + V + + K + AN ++ N+DP+V + F+ FG I T+ + RD D G S+GFGF++++ + A++ ++ +++ V+ A KK + E Sbjct: 131 RTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETGSL--GYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKI-TSCVLQRDED-GKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREE 310
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24 Identity = 64/181 (35.36%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAE 649 A+ YVG+L V E L++ F AGPV+++ V +D +T GY +V F+ DA+ A+ +N + KPIR+ + +D G N+FI NLD +D K +YDTFSAFG I+ + K+ D + GNS+G+GF+ +++ EA++ +I+ +NG L +++ V + + + G A+ Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNIL-SCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAK 180 HSP 2 Score: 87.8113 bits (216), Expect = 6.089e-17 Identity = 59/183 (32.24%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 89 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC-NRQITVSYAYKK 613 S R+ ++ NLD + + +++ F G +++ V D N +GYGFV F +EE A+ +I +N + L GK + V K + +K L A LF + N D D++ L + F +G I T+ K+M D G S+GFGF+++++ EA++AA++A+NG+ + + + V+ A KK Sbjct: 83 SLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGN-SKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI-TSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK 262 HSP 3 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 52/186 (27.96%), Postives = 91/186 (48.92%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKL-YGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 YV N +E L E F G + + Y + +G+GFV F + E A+ A++ LN + GK + V +A Q + G NL++ NLD +D+ L FS +G I T+ K+M D + G S+GFGF+ +++ + A+ +NG+ + ++ + V+ A +K+ + Sbjct: 186 YVKNFTEDFDDEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNI-TSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEER 368
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPAE 649 A + + A+ YVG+L VTE+LL+ F GPV+++ + +D+VT GY +V F DA A+ +N + GK IR+ + +D G N+FI NLD +D K LY+ FSAFG I+++ K+M D D G S+G+ F+ + + A+D AIE MNG+ L ++ V + +KD + E +E Sbjct: 4 AAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSS-KVMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASE 188 HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 57/179 (31.84%), Postives = 97/179 (54.19%), Query Frame = 2 Query: 98 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 R+ ++ NLD + + L+E F G +++ V D + +GY FV F+++ AD AI+ +N L G + R ++ ++ + N++I N D+D++ L D FS +G ++ K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + I V A KK Sbjct: 94 RSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLS-VKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKK 268 HSP 3 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 53/190 (27.89%), Postives = 99/190 (52.11%), Query Frame = 2 Query: 92 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 610 ++ ++ Y+ N + +E L ++F + G ++V V D + +G+GFV F S E A A++ +N + G+ I V +A + K+ + G L+I NLD +D++ L + FS+FG I + K+M++ G S+GFG I + S E + A+ MNG+ L ++ ++++ A + Sbjct: 184 SKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSI-SRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 369
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 60/177 (33.90%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 107 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL-DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 634 D YVGNLD +TE++L + F GP+ N+ + D+ N + Y FVE+ DA+ A++ LN ++ +++N A Q ++S D NLF+G+L+ +VD++ L + F F ++ +M D TG+SRG+GF+S+ S + + A+++M GQ L R + +++A K+D + Sbjct: 74 DRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINWAFQSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSG-HVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNN 248
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 64/175 (36.57%), Postives = 106/175 (60.57%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 628 A+ YVG L+P V+E LL+++F G V ++ V +D +TN GY +V F E AI+ LN + GKP R+ + +D G+ N++I NL P +D K L++TFS FG I+ + K+ D + G SRGFGF+ +++ + AIEA++G + ++++ V+ + KKD + + Sbjct: 38 ASLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNIL-SCKVATD-ENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSK 210 HSP 2 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 2 Query: 119 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAAN 667 YV N+D + ++E ELF + G + + + KD L +G+GFV F A A+ LN ++ G+ + V +A + + L G NLF+ NLD +D++ L + F+ FG I T+ K+MRD +TGNSRGFGF+ + + E + AI N Q + + + V+ A +K+ R A++I A N Sbjct: 222 YVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKL-RGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTI-TSAKVMRD-ETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEV---RRNQLAQQIQARN 415
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: PAP1A_DICDI (Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24 Identity = 64/174 (36.78%), Postives = 103/174 (59.20%), Query Frame = 2 Query: 110 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 628 ++ YVG+L P+V+E+ L+E+F Q G V N+ V +D T Y +V + + DA+ A+ LN + GK R+ + +D G N+FI NLD +D K LYDTFSAFG I+ + K++ D D +S+GFGF+ Y++ E++D AI +NG + +++ V +G+ Sbjct: 10 SSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNIL-SCKVVTD-DGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQ 181 HSP 2 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 57/193 (29.53%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 89 SAERNQDA-----TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDV---GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 622 S ER Q + NL V + L EL Q G + N+ + D +G+GF F S E A ++ N +GKPI ++ + ++ K + + G NL+I N+D +D L + FS FG I T+ +M+D S+GFGF+ Y + + + A+ MNG+ + + + V+ A +KD + Sbjct: 176 SKERGQPTEVKFTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADD-KGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFGTI-TSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVALAQRKDIR 366
BLAST of FC930764 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 62/173 (35.84%), Postives = 99/173 (57.23%), Query Frame = 2 Query: 104 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 613 Q T YVGNL VTE L+ +LF Q GP + + + +N Y FVEF DA A+ +N K+ GK ++VN A S KK ++F+G+L P++ + + F+ FG I ++ ++++D TG S+G+GF+S+ + ++ AI M GQ+L RQI ++A +K Sbjct: 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI-SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRK 176 The following BLAST results are available for this feature:
BLAST of FC930764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930764 ID=FC930764; Name=FC930764; organism=Citrus clementina; type=EST; length=704bpback to top |