FC930767

Overview
NameFC930767
Unique NameFC930767
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11318 contig Ccv1_Contig11318:467..1171. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_RAT (Cytoplasmic aconitate hydratase OS=Rattus norvegicus GN=Aco1 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.521e-66
Identity = 115/199 (57.79%), Postives = 146/199 (73.37%), Query Frame = 3
Query:   63 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            ++PF  +   L     G+  KF++L  L D R  +LP+SIR+LLE+A+RNCD F VKK DIE I++W     K +E+PFKPARV+LQDFTGVPAVVD A MRDA+ KLG +  KINP+ P DLVIDHS+QV   R  ++++ N + EF+RN+ERF FLKWGS AF NM ++PPGSGI+HQVNLEYL RVVF+   CY P
Sbjct:    2 KNPFAHLAEPLDPAQPGK--KFFNLNKLEDSRYGRLPFSIRVLLEAAVRNCDEFLVKKNDIENILNWSIMQHKSIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGNPEKINPVCPADLVIDHSIQVHFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFCNMRIIPPGSGIIHQVNLEYLARVVFDQDGCYYP 198          

HSP 2 Score: 31.9574 bits (71), Expect = 1.521e-66
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G  YPDS+VGTDSHT
Sbjct:  190 FDQDGCYYPDSLVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_RABIT (Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.397e-66
Identity = 115/198 (58.08%), Postives = 147/198 (74.24%), Query Frame = 3
Query:   66 HPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +PF  +   L     G+  KF++L  L+  R  +LP+SIR+LLE+A+RNCD F VKKEDIE I++W  +    +E+PFKPARV+LQDFTGVP+VVD A MRDA+ KLG D  KINP+ PVDLVIDHS+QVD  R  ++++ N + EF+RN+ERF FLKWGS AF NM ++PPGSGI+HQVNLEYL RVVF+    Y P
Sbjct:    3 NPFAYLAEPLDPAQPGK--KFFNLNKLDYSRYGRLPFSIRVLLEAAVRNCDKFLVKKEDIENILNWNVTQHMNIEVPFKPARVILQDFTGVPSVVDFAAMRDAVKKLGGDPEKINPICPVDLVIDHSIQVDFNRRADSLQKNQDLEFERNRERFEFLKWGSKAFRNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYP 198          

HSP 2 Score: 31.9574 bits (71), Expect = 4.397e-66
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G  YPDS+VGTDSHT
Sbjct:  190 FDQDGYYYPDSLVGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_CAEEL (Probable cytoplasmic aconitate hydratase OS=Caenorhabditis elegans GN=aco-1 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 8.149e-65
Identity = 113/176 (64.20%), Postives = 135/176 (76.70%), Query Frame = 3
Query:  108 GGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVF 635
            G    K++ L  LND R  +LP SI+ LLE+A+R+CD F V K+D+E I+DW+NS   Q EIPFKPARV+LQDFTGVPAVVDLA MRDA+  +G+D  KINP+ PVDLVIDHSVQVD   +  A+  N   EF+RN+ERF FLKWGS AF N+L+VPPGSGIVHQVNLEYL R VF
Sbjct:   13 GDNVYKYFDLNGLNDARYNELPISIKYLLEAAVRHCDEFHVLKKDVETILDWKNSQRNQAEIPFKPARVILQDFTGVPAVVDLAAMRDAVQNMGADPAKINPVCPVDLVIDHSVQVDHYGNLEALAKNQSIEFERNRERFNFLKWGSKAFDNLLIVPPGSGIVHQVNLEYLARTVF 188          

HSP 2 Score: 34.2686 bits (77), Expect = 8.149e-65
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  644 GMLYPDSVVGTDSHT 688
            G+LYPDSVVGTDSHT
Sbjct:  193 GVLYPDSVVGTDSHT 207          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_DEIRA (Aconitate hydratase OS=Deinococcus radiodurans GN=acn PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 2.100e-56
Identity = 106/180 (58.89%), Postives = 132/180 (73.33%), Query Frame = 3
Query:   93 LPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVV 632
            L  PG  +   FY+L  L    + +LP SI++LLES +R  +++ V++ED+E +  W  + P +VEIPFKPARV+LQDFTGVPAVVDLA MR AM KLG D +KINPL+PVDLVIDHSVQVD   +E A+  NM  EF+RN+ER+ FL+WG  AF N  VVPP SGIVHQVNLEYL + V
Sbjct:   15 LQVPGSDKKLYFYNLNKLQGHDVSRLPVSIKVLLESVLREANDYDVRREDVETVAGWSATNP-EVEIPFKPARVILQDFTGVPAVVDLAAMRSAMVKLGGDPSKINPLIPVDLVIDHSVQVDEFGTEFALANNMALEFERNRERYEFLRWGQQAFDNFGVVPPASGIVHQVNLEYLAKGV 193          

HSP 2 Score: 30.0314 bits (66), Expect = 2.100e-56
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  647 MLYPDSVVGTDSHTP*LMG 703
            ++YPDS+VGTDSHT  + G
Sbjct:  203 VVYPDSLVGTDSHTTMING 221          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_BACSU (Aconitate hydratase OS=Bacillus subtilis GN=citB PE=1 SV=4)

HSP 1 Score: 205.682 bits (522), Expect = 2.483e-54
Identity = 99/177 (55.93%), Postives = 128/177 (72.32%), Query Frame = 3
Query:  111 GEFGKFYSLPALNDP---RIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVV 632
            G+   +YSL AL D    ++ KLPYSI++LLES +R  D F +KKE +E +  W  +  K +++PFKP+RV+LQDFTGVPAVVDLA +R AM  +G D +KINP +PVDLVIDHSVQVD   +E+A+  NM+ EF+RN ER+ FL W   AF+N   VPP +GIVHQVNLE+L  VV
Sbjct:   23 GKTYHYYSLKALEDSGIGKVSKLPYSIKVLLESVLRQVDGFVIKKEHVENLAKWGTAELKDIDVPFKPSRVILQDFTGVPAVVDLASLRKAMAAVGGDPDKINPEIPVDLVIDHSVQVDKAGTEDALAVNMDLEFERNAERYKFLSWAKKAFNNYQAVPPATGIVHQVNLEFLASVV 199          

HSP 2 Score: 28.1054 bits (61), Expect = 2.483e-54
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  653 YPDSVVGTDSHTP*LMG 703
            YPD++VGTDSHT  + G
Sbjct:  211 YPDTLVGTDSHTTMING 227          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_COREF (Aconitate hydratase OS=Corynebacterium efficiens GN=acn PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 4.984e-52
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 3
Query:  126 FYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +Y+L A+  P +EKLPYS+++L E+ +R  D   + +E IE I +W+ SA   +EI F PARVL+QDFTGVP VVDLA MR+A+  LG D +K+NPL P ++VIDHSV V+     +A++ N+E E++RN+ER+ FL+WGS AF N  VVPPG+GIVHQVN+EYL RVVF+      P
Sbjct:   23 YYALSAV--PGMEKLPYSLKVLGENLLRTEDGANITEEHIEAIANWDASADPSIEIQFTPARVLMQDFTGVPCVVDLATMREAVKTLGGDPDKVNPLNPAEMVIDHSVIVEAFGRPDALEKNVEIEYERNEERYQFLRWGSEAFSNFRVVPPGTGIVHQVNIEYLARVVFDNDGLAYP 198          

HSP 2 Score: 30.4166 bits (67), Expect = 4.984e-52
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G+ YPD+ +GTDSHT
Sbjct:  190 FDNDGLAYPDTCIGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 1.199e-50
Identity = 98/173 (56.65%), Postives = 121/173 (69.94%), Query Frame = 3
Query:  126 FYSLPALND---PRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVF 635
            +YSLP         I KLPYS+++LLE+ +RN D   VKK DI  +  W      + EI F+PARVL+QDFTGVPAVVDLA MR+AM KLG D+ KINPLVPVDLVIDHSV V+      A   N+  E+++N+ER+ FLKWG +AF N  VVPPG+GI HQVNLEYL + V+
Sbjct:   22 YYSLPTAEKNGLKGISKLPYSMKVLLENLLRNEDGRSVKKADIVAVSKWLRKKSLEHEIAFRPARVLMQDFTGVPAVVDLAAMRNAMQKLGGDAEKINPLVPVDLVIDHSVIVNFFGDNKAFAKNVTEEYKQNQERYEFLKWGQAAFSNFSVVPPGTGICHQVNLEYLSQTVW 194          

HSP 2 Score: 30.4166 bits (67), Expect = 1.199e-50
Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  623 TGCFQYHGMLYPDSVVGTDSHT 688
            TG F+   + YPDS+VGTDSHT
Sbjct:  206 TGTFE---VAYPDSLVGTDSHT 224          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_CORGL (Aconitate hydratase OS=Corynebacterium glutamicum GN=acn PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.655e-50
Identity = 92/178 (51.69%), Postives = 126/178 (70.79%), Query Frame = 3
Query:  126 FYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659
            +++L A+  P +EKLPYS+++L E+ +R  D   +  E IE I +W+ S+   +EI F PARVL+QDFTGVP VVDLA MR+A+  LG D N +NPL P ++VIDHSV V+     +A+  N+E E++RN+ER+ FL+WGS +F N  VVPPG+GIVHQVN+EYL RVVF+      P
Sbjct:   23 YFALSAV--PGMEKLPYSLKVLGENLLRTEDGANITNEHIEAIANWDASSDPSIEIQFTPARVLMQDFTGVPCVVDLATMREAVAALGGDPNDVNPLNPAEMVIDHSVIVEAFGRPDALAKNVEIEYERNEERYQFLRWGSESFSNFRVVPPGTGIVHQVNIEYLARVVFDNEGLAYP 198          

HSP 2 Score: 30.8018 bits (68), Expect = 2.655e-50
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  632 FQYHGMLYPDSVVGTDSHT 688
            F   G+ YPD+ +GTDSHT
Sbjct:  190 FDNEGLAYPDTCIGTDSHT 208          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.461e-50
Identity = 93/175 (53.14%), Postives = 125/175 (71.43%), Query Frame = 3
Query:  120 GKFYSLPALND------PRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGR 626
            GK YSL +L          + +LPYSIR+LLE+ +RN D ++VK++D+ K++DW+  A  + EIP  PARV++QDFTGVPAVVDLA MR A+   G D++KINPLV   +VIDHSVQVD   ++ A+  N+  EF+RN ER++ LKW   AF + +VVPPG GI+HQVNLEYL +
Sbjct:   16 GKKYSLYSLKKLSQELGKDVTRLPYSIRVLLENQLRNIDGYKVKEDDMHKVLDWDAKASSRPEIPHMPARVVMQDFTGVPAVVDLAAMRKAIKDAGGDADKINPLVDTAMVIDHSVQVDFYGTKTALAQNVAKEFERNGERYSLLKWAQKAFDDFIVVPPGMGIIHQVNLEYLAK 190          

HSP 2 Score: 29.261 bits (64), Expect = 3.461e-50
Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  647 MLYPDSVVGTDSHTP*LMG 703
            ++YPD++VGTDSHT  + G
Sbjct:  202 VIYPDTLVGTDSHTTMING 220          
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACON_LEGPH (Aconitate hydratase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=acn PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.882e-50
Identity = 96/180 (53.33%), Postives = 128/180 (71.11%), Query Frame = 3
Query:  111 GEFGKFYSLPALNDPR---IEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNT 641
            G+   +YSL    +     I +LPYS+++LLE+ +R  D   V  +DI+ I DW ++   Q EI F+P RVL+QDFTGVPAVVDLA MR A+ K+G +++KI+PL PVDLVIDHSV VD   S +A++ N + E +RNKER+ FL+WG  AF N  VVPPG+GI HQVNLEYLG+ V+N+
Sbjct:   18 GKTYNYYSLKEAENKHFKGINRLPYSLKVLLENLLRFEDGNTVTTKDIKAIADWLHNKTSQHEIAFRPTRVLMQDFTGVPAVVDLAAMRTAIVKMGGNADKISPLSPVDLVIDHSVMVDKFASADALEVNTKIEIERNKERYEFLRWGQKAFSNFQVVPPGTGICHQVNLEYLGKTVWNS 197          

HSP 2 Score: 28.1054 bits (61), Expect = 5.882e-50
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  653 YPDSVVGTDSHTP*LMG 703
            YPD++VGTDSHT  + G
Sbjct:  206 YPDTLVGTDSHTTMING 222          
The following BLAST results are available for this feature:
BLAST of FC930767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ACOC_RAT1.521e-6657.79Cytoplasmic aconitate hydratase OS=Rattus norvegic... [more]
ACOC_RABIT4.397e-6658.08Cytoplasmic aconitate hydratase OS=Oryctolagus cun... [more]
ACOC_CAEEL8.149e-6564.20Probable cytoplasmic aconitate hydratase OS=Caenor... [more]
ACON_DEIRA2.100e-5658.89Aconitate hydratase OS=Deinococcus radiodurans GN=... [more]
ACON_BACSU2.483e-5455.93Aconitate hydratase OS=Bacillus subtilis GN=citB P... [more]
ACON_COREF4.984e-5253.37Aconitate hydratase OS=Corynebacterium efficiens G... [more]
ACON_BRAJA1.199e-5056.65Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
ACON_CORGL2.655e-5051.69Aconitate hydratase OS=Corynebacterium glutamicum ... [more]
ACON_FRATH3.461e-5053.14Aconitate hydratase OS=Francisella tularensis subs... [more]
ACON_LEGPH5.882e-5053.33Aconitate hydratase OS=Legionella pneumophila subs... [more]

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Properties
Property NameValue
Genbank descriptionC34108G11EF PostHarvP1 Citrus clementina cDNA clone C34108G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930767 ID=FC930767; Name=FC930767; organism=Citrus clementina; type=EST; length=704bp
AGATCAGAACCGTTGCTCCTGCCATCGAACGGCTCGAACGCGCCTTTGCT
ACTATGGCTGCTGAACATCCATTCAAGGAGATCTTGACCGCTCTTCCAAA
GCCAGGAGGTGGCGAGTTTGGAAAGTTCTATAGCCTTCCTGCACTCAATG
ATCCAAGAATTGAGAAGCTGCCATACTCTATCAGAATCCTGCTTGAATCT
GCTATTCGTAATTGTGACAACTTTCAAGTTAAGAAGGAAGATATCGAGAA
AATTATTGACTGGGAAAATTCTGCACCAAAGCAAGTTGAAATTCCCTTCA
AGCCTGCTCGTGTATTGTTGCAGGATTTTACTGGAGTACCAGCCGTGGTT
GACCTTGCCTGCATGCGTGATGCTATGAACAAGCTTGGCAGTGATTCCAA
CAAGATCAATCCTCTTGTTCCTGTAGATCTTGTCATTGATCATTCGGTTC
AGGTTGATGTAACAAGATCGGAAAATGCAGTTAAGGCAAATATGGAATTT
GAATTTCAGAGGAACAAGGAGAGATTCGCTTTCCTCAAATGGGGATCTAG
TGCTTTCCATAACATGCTTGTTGTTCCTCCTGGTTCTGGTATTGTGCATC
AGGTCAATCTTGAATATCTGGGACGGGTTGTTTTCAATACCACGGCATGC
TATACCCCGACAGTGTGGTTGGTACTGATTCTCATACACCATGATTGATG
GGTT
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