FC930767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: IREB2_RAT (Iron-responsive element-binding protein 2 OS=Rattus norvegicus GN=Ireb2 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32 Identity = 65/137 (47.45%), Postives = 95/137 (69.34%), Query Frame = 3 Query: 57 AAEHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTR 467 +A + F+ ++ L G KF+++P L + + LPYSIR+LLE+A+RNCD F +KKED+ I+DW+ VE+PF PARV+LQDFTG+PA+VD A MR+A+ LG D K++P P DL +DHS+Q+D ++ Sbjct: 5 SAGYTFEYLIETL---NGSSQKKFFNVPKLGGTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVINILDWKTKQ-SNVEVPFFPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSK 137
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: IREB2_PIG (Iron-responsive element-binding protein 2 OS=Sus scrofa GN=IREB2 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 61/115 (53.04%), Postives = 84/115 (73.04%), Query Frame = 3 Query: 123 KFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTR 467 KF+++P L + + LPYSIR+LLE+A+RNCD F +KKED+ I+DW+ VE+PF P RVLLQDFTG+PA+VD A MR+A+ LG D K++P P DL +DHS+Q+D + Sbjct: 24 KFFNVPRLGGTKYDVLPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWKTKQ-SNVEVPFFPGRVLLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFNK 137
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: IREB2_HUMAN (Iron-responsive element-binding protein 2 OS=Homo sapiens GN=IREB2 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.816e-30 Identity = 61/115 (53.04%), Postives = 84/115 (73.04%), Query Frame = 3 Query: 123 KFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTR 467 KF+ + L + + LPYSIR+LLE+A+RNCD F +KKED+ I+DW+ VE+PF PARVLLQDFTG+PA+VD A MR+A+ LG D K++P P DL +DHS+Q+D ++ Sbjct: 24 KFFDVSKLGT-KYDVLPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWKTKQ-SNVEVPFFPARVLLQDFTGIPAMVDFAAMREAVKTLGGDPEKVHPACPTDLTVDHSLQIDFSK 136
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: IREB2_CHICK (Iron-responsive element-binding protein 2 OS=Gallus gallus GN=IREB2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29 Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 3 Query: 123 KFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTR 467 +FY++ L + + LPYSIR+L ES+IRNCD F VK+ D I+DW+ VE+PF PARV+LQDFTG+PA+VD A MR+A+ G D K+NP P DL +DHS+Q+D ++ Sbjct: 24 RFYNVSKLGGTKYDVLPYSIRVLFESSIRNCDGFLVKETDAMNILDWKTKQ-NDVEVPFCPARVVLQDFTGIPAMVDFAAMREAVRNAGGDPVKVNPACPTDLTVDHSLQIDFSK 137
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.442e-28 Identity = 60/135 (44.44%), Postives = 88/135 (65.19%), Query Frame = 3 Query: 63 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTR 467 E+PF ++ L G F+++ L + LPY IR++LE+ +RNCD VK++D I++W+ + EIPF PARV+LQDFTG+PA+VD A MRDA++K G D ++NP P DL+ DHS+Q+D T+ Sbjct: 3 ENPFHYLVETL---SGTSDKTFFNVSKLKATEYDSLPYCIRVVLEAVVRNCDGVLVKEQDAFNILNWKTKCEFK-EIPFLPARVMLQDFTGIPAMVDFAAMRDAISKFGKDPKQVNPACPTDLIADHSLQLDFTK 133 HSP 2 Score: 73.9442 bits (180), Expect = 3.861e-16 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 459 VTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659 + E A+K+ +E EF RNKER F KW S AF N+ V+PP +G VHQVNLE+L RVV C P Sbjct: 202 IAEPETALKS-LEIEFNRNKERLQFFKWCSKAFQNVAVIPPETGTVHQVNLEFLSRVVMEEKGCIYP 267 HSP 3 Score: 31.5722 bits (70), Expect = 3.861e-16 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 644 GMLYPDSVVGTDSHT 688 G +YPDSV+GTDSHT Sbjct: 263 GCIYPDSVLGTDSHT 277
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: IREB2_XENTR (Iron-responsive element-binding protein 2 OS=Xenopus tropicalis GN=ireb2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.667e-28 Identity = 60/135 (44.44%), Postives = 89/135 (65.93%), Query Frame = 3 Query: 63 EHPFKEILTALPKPGGGEFGKFYSLPALNDPRIEKLPYSIRILLESAIRNCDNFQVKKEDIEKIIDWENSAPKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVTR 467 E+PF ++ L G F+++ L + LPY IR++LE+ +RNCD VK++D I++W+ + + EIPF PARV+LQDFTG+PA+VD A MRDA++K G D ++NP P DL+ DHS+Q+D T+ Sbjct: 3 ENPFHYLVEPL---SGTSDKTFFNVSKLKATEYDSLPYCIRVVLEAVVRNCDGVLVKEQDAFNILNWKATCEFK-EIPFLPARVMLQDFTGIPAMVDFAAMRDAISKFGRDPKQVNPACPTDLIADHSLQLDFTK 133 HSP 2 Score: 70.8626 bits (172), Expect = 2.416e-15 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 3 Query: 459 VTRSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVV 632 + E A+K+ +E EF RNKER F KW + AFHN+ V+PP +G VHQVNLE+L RVV Sbjct: 204 IAEPEAALKS-LEIEFNRNKERLQFFKWCTKAFHNVAVIPPETGTVHQVNLEFLSRVV 260 HSP 3 Score: 31.9574 bits (71), Expect = 2.416e-15 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 644 GMLYPDSVVGTDSHT 688 G +YPDSV+GTDSHT Sbjct: 265 GFIYPDSVLGTDSHT 279
BLAST of FC930767 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25 Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 3 Query: 465 RSENAVKANMEFEFQRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTTACYTP 659 ++ENAV+ANME EF+RN+ERF FLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNT P Sbjct: 4 KTENAVQANMELEFKRNRERFGFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGLLYP 68 The following BLAST results are available for this feature:
BLAST of FC930767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930767 ID=FC930767; Name=FC930767; organism=Citrus clementina; type=EST; length=704bpback to top |