FC930769
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: GLRX3_RAT (Glutaredoxin-3 OS=Rattus norvegicus GN=Glrx3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 34/105 (32.38%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 86 VISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 400 V+ + + E L+ + K L+VV F A W P C M+ +++ELAK+ P V F+K++ + + V+E++ + ++PTF+ K + ++R+ GA EL V++H Sbjct: 15 VVEVGSARQFEELLR--LKTKSLLVVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRH 117
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEBR (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.567e-12 Identity = 32/95 (33.68%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 116 NEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 400 NE L+K + +LI+VDF A+WC PC+++SP L+ + FLKV+ D + + +++ AMPTF+ K + ++ + GA + + + KH Sbjct: 13 NEILEKS-DSNRLIIVDFFANWCGPCRMISPAFERLSMEFGNATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGANESAIISTIRKH 106
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: TXND2_HUMAN (Thioredoxin domain-containing protein 2 OS=Homo sapiens GN=TXNDC2 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 30/84 (35.71%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 140 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAV 391 A ++L+ VDF+A+WC PC+ + P L+ K V+FL+VD D + V E A+ +PTF K+ + ++ + GA K++L+ + Sbjct: 466 AGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADNCEEVVRECAIMCVPTFQFYKKEEKVDELCGALKEKLEAVI 549
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 27/86 (31.40%), Postives = 52/86 (60.47%), Query Frame = 2 Query: 143 AKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 400 A +LI++DF A+WC PC+++SPI + + + FLKV+ D + + + + + AMPTF+ K + ++ + GA + + + +H Sbjct: 21 ANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 106
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: GLRX3_BOVIN (Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 31/88 (35.23%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 137 IAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEKH 400 + AK L+VV F A W P C M+ +++ELAK+ V F+K++ + + V+E++ + ++PTF+ K + ++R+ GA EL V++H Sbjct: 27 LRAKSLLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRH 114
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: TRXF_SPIOL (Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.120e-11 Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 140 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVD-ELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVE 394 A K +V+D WC PCK M+P +LA++ VIFLK+D + E K++A+E + +PTF + KE V+ + GAK D+L A++ Sbjct: 100 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQ 185
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: THIO1_DROME (Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.120e-11 Identity = 35/97 (36.08%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 92 SCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDEL 379 S T+ ++++++ A KLIV+DF A+WC PCK M + LA+K + + LK+DVD+ + + E + V +MPTFV ++ + L GA + +L Sbjct: 3 SVRTMNDYHKRIEA--ADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLRQNRRLASFAGADEHKL 97
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: TXND2_MOUSE (Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 36/112 (32.14%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 62 IKMAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAKKDELQLAVEK 397 I+ EEG V E + E L+ A +KL+ VDF+A+WC PC++M P+ L+ K VIFL+VD ++ + + ++ + +PTF K + + GA +L+ ++ + Sbjct: 404 IETLEEGLVRVIKDKEEFEEVLKD--AGEKLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 513
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 31/78 (39.74%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 137 IAAKKLIVVDFTASWCPPCKLMSPILSELA-KKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAK 367 +++ K ++VDF A+WC PCK+++P+L E+A ++ + K+DVD A + V ++PT +L K+G+ ++RIVGAK Sbjct: 22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAK 99
BLAST of FC930769 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 31/78 (39.74%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 137 IAAKKLIVVDFTASWCPPCKLMSPILSELA-KKLPAVIFLKVDVDELKSVAEEWAVEAMPTFVLTKEGKVLERIVGAK 367 +++ K ++VDF A+WC PCK+++P+L E+A ++ + K+DVD A + V ++PT +L K+G+ ++RIVGAK Sbjct: 22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAK 99 The following BLAST results are available for this feature:
BLAST of FC930769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930769 ID=FC930769; Name=FC930769; organism=Citrus clementina; type=EST; length=566bpback to top |