FC930781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 7.178e-11 Identity = 32/99 (32.32%), Postives = 46/99 (46.46%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQRAYW 699 G PN VT++ I K N+E A K YR M N+G P+ Y ++ + G E A G E K WVP+ + L+ L G + +V + W Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD-EPVYGLLVDLWGKAGNVDKAWQW 591 HSP 2 Score: 38.1206 bits (87), Expect = 7.178e-11 Identity = 28/123 (22.76%), Postives = 52/123 (42.28%), Query Frame = 2 Query: 35 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 AK + E+ ++ E + G KP+ TYNR+I ++ + +M +P+ ++ L+ K + + Q M+ G+ Y+V I+ L K A L EM+ + Sbjct: 372 AKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ 493
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 7.273e-11 Identity = 36/124 (29.03%), Postives = 58/124 (46.77%), Query Frame = 2 Query: 35 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406 A + E ++VF E K GI+P++ TY+ VI A C + A+M PNA +F L+ K + E V +V M++ G + YN I + C+ A +L+ M+ K+ Sbjct: 268 AGEISEAEKVFKEM-KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390 HSP 2 Score: 31.9574 bits (71), Expect = 7.273e-11 Identity = 17/66 (25.76%), Postives = 30/66 (45.45%), Query Frame = 1 Query: 409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI 606 +PN+VTY+ + F + + K + M + + PN + Y +V C G + A KE + Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1) HSP 1 Score: 45.0542 bits (105), Expect = 7.285e-11 Identity = 24/89 (26.97%), Postives = 45/89 (50.56%), Query Frame = 1 Query: 409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675 KP++ TY+ + F G E K+ + + S P+ Y ++V+ +C ++ A G+ E I +G++P T ++L GL +K Sbjct: 389 KPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNK 477 HSP 2 Score: 41.9726 bits (97), Expect = 7.285e-11 Identity = 25/113 (22.12%), Postives = 51/113 (45.13%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCE----------XXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 GI+P++ TYN ++ C + EM ++ I+P+ +SF ++ + + K E +++M+ G+ + Y + LC + EA+ LL+ M+ Sbjct: 237 GIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMV 349 The following BLAST results are available for this feature:
BLAST of FC930781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930781 ID=FC930781; Name=FC930781; organism=Citrus clementina; type=EST; length=701bpback to top |