FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR2_ARATH (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.294e-22 Identity = 65/218 (29.82%), Postives = 111/218 (50.92%), Query Frame = 3 Query: 66 DLELSLNTFTPR--ISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFL--IEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 701 +LE SL++ P IS V Q L+ K + RFF W GF H S+ ++++ LG + + +FL IE R N ++ F ++R+Y A L ++++ F M + GI PS+ + LL L KR +AH FD + + TP T++ L+ G + EA ++F +M C D++ +N++++ +C+AG + AH +L Sbjct: 52 ELESSLSSLHPSQTISRTTVLQTLRLIK-VPADGLRFFDWVSN-KGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21 Identity = 73/236 (30.93%), Postives = 114/236 (48.31%), Query Frame = 3 Query: 6 SADLVSEISRVLSDHR-DPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 S +V +S VL R P E +L RI QVLK+ + G +A FF W KR PGF+H +Y +V LG KQF + L E+ + + N + ++ +Y RAN N+A+ FN+M E G KP L+ K + +A + + +P TYS+++ LG G L A KLF EM+++ C +++ +N +++ KA N A + R+ Sbjct: 298 SGHIVENVSSVLRRFRWGPA--AEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21 Identity = 68/237 (28.69%), Postives = 118/237 (49.79%), Query Frame = 3 Query: 3 PSADLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFN-----------RMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 680 PS+D IS++L + +P H +E SL ++ NL+ Q L R ++ A FF + + +P + S+++++DILG +QF ++ ++E+ + +PE F I+++ A L A+RAF+ R+VEFG LL LCK + K+A F+ K EF K Y+IL+ G + + A K EM+E +++ +N LL +C+ ++ Sbjct: 37 PSSD-AELISQMLITNHNPFHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQT-----SPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVEFGF---------LLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASL 258
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.380e-21 Identity = 70/246 (28.46%), Postives = 124/246 (50.41%), Query Frame = 3 Query: 6 SADLVSE----ISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVA-HQFFDNAKHEFTPTVKTYSILVRGLGDV-GELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA----HGMLRECV 713 S +LVSE IS+++ D +L L + S LV ++L R +N +A FF+WA + G+ S YH ++ ILG ++F W + E+R+ +N + I++R Y + AI F+ F ++ I D LL ALC+ K+V A H F N K ++ K+++I++ G +V G EA +++ EM D+++++S++ K G++++ M +EC+ Sbjct: 89 SDELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCN-KDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP416_ARATH (Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 61/210 (29.05%), Postives = 106/210 (50.48%), Query Frame = 3 Query: 69 LELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFE-INPEI--FWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 ++ SL++ +S ++V VL R G + FF WA R PG GSY +++ LG K F+ F++++ + E +NP++ I + ++ R + AI F FG+K S + LL LC+R HV A F+ K +Y+I++ G +GE+ E K+ EM+E D L+++ L+E + + G I+++ Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFS----FMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.159e-20 Identity = 65/230 (28.26%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 3 PSADLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWA-KRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 P AD + +LS H D + L+T T + NLV VLKR N G A +FF + + H A S+ + +DI +W + +R + +P+ F IV YA A P+ A++ F M E G + + +L LCK K V+ A++ F + F+ TY++++ G + +A ++ EM+ER ++ +N++L+ +AG I A Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLR-IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249 HSP 2 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 41/167 (24.55%), Postives = 82/167 (49.10%), Query Frame = 3 Query: 216 SYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECV 713 S++ ++D+L +K+ ++ +R F ++ + ++L + A+ MVE GI P++ + +L + ++ A +FF + K + V TY+ +V G G GE+ AR +FDEM+ + +N++++ +CK N++ A M E V Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327 HSP 3 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 41/180 (22.78%), Postives = 83/180 (46.11%), Query Frame = 3 Query: 195 GFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR-----ECVP 716 G + +Y+ ++ Q W+F +E+++ EI+ + V+ + A A F+ M+ G+ PS+ + ++ LCK+ +V+ A F+ + + P V TY++L+RGL GE S +L M C + +N ++ + +++A G+ +C+P Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19 Identity = 60/218 (27.52%), Postives = 111/218 (50.92%), Query Frame = 3 Query: 66 DLELSLNTFTPRISTNLVEQVLKRCK---NLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYD---LDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 701 +L+ SL++ +S +L+++VLKR + F+ +A I GF HS+ S ++ ILG ++F +W+ LIE + I+P +VL A+ + +F + + P +D + LL LC+ K + A + + KH+F P ++T++IL+ G EA F+EM + D++ +NSL++ CK I++A+ ++ Sbjct: 57 ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLI 269 HSP 2 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 53/213 (24.88%), Postives = 104/213 (48.83%), Query Frame = 3 Query: 93 TPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPLELS 728 +PR ++ +V K C ++ + F+ + + +P F +A ++ L+ L K + ++ F+ + + F I+L + + +A F M G+KP + + L+ CK + ++ A++ D + E TP V TY+ ++ GLG +G+ +AR++ EM E C D+ A+N+ + C A + +A ++ E V LS Sbjct: 143 SPRTMQVVLGRVAKLC-SVRQTVESFWKFKRLVPDFFDTA-CFNALLRTLCQEKSMTDARNVYHSLKHQ--FQPDLQTFNILLSGWKSSE---EAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19 Identity = 64/216 (29.63%), Postives = 104/216 (48.15%), Query Frame = 3 Query: 63 HDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 H E +L+ F R+ QVLK+ N +A FF W KR PGF+H +Y +V LG KQF + L E+ + + N + ++ +Y RAN +A+ FN+M E G +P L+ K + +A + + +P TYS+++ LG G L A +LF EM+ + C +++ N ++ KA N + A + R+ Sbjct: 311 HAAEEALHNFGFRMDAYQANQVLKQMDNYA-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP366_ARATH (Putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial OS=Arabidopsis thaliana GN=At5g06400 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19 Identity = 66/227 (29.07%), Postives = 110/227 (48.46%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKV---AHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 V EI RVLS RD E +L T + + LV +VL+ K G + RFF W + G++H++ +Y++ + + G K F + E+R Q I + + I++ Y R L N AIR F M + G+ PS L+ LC++K V F + + F P + + L +VG +A+ D + + PV + A++ + A+C+ G ++EA Sbjct: 615 VQEICRVLSSSRDWERTQE-ALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMR-RQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEA 838 HSP 2 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 59/233 (25.32%), Postives = 110/233 (47.21%), Query Frame = 3 Query: 15 LVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPV-DILAHNSLLEAMCKAGNIDEAHGMLRE 707 +V EI+ V+ D +E L + R +VE VLKRC + A RFF W K+ GF H G Y+ ++ I G + ++ D L+ E + + + I++ Y +A + F +M + G + + ++ +LC +A +F+ + T ++TY +L+ + ++ + + D+M+ R C + + A LL++ C +G I EA ++RE Sbjct: 125 VVHEITSVVRGD-DVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMV-DELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMV-RICEISEHDAFGYLLKSFCVSGKIKEALELIRE 354
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP133_ARATH (Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18 Identity = 58/217 (26.73%), Postives = 109/217 (50.23%), Query Frame = 3 Query: 69 LELSLNTFTPRISTNLVEQVLKRCKN--LGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRK--HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 +E +L P +S N++ V+K N LGF RFF+WA R S S+ +++D+L L W L E++ ++ F +++ AYA+ + A+ +F RM EF +P ++ + +L + + + + + + K +P + T+ IL+ GL G S+A+K+FD+M R + + + L+ +C+ G+ D+A + E Sbjct: 47 IEPALEPLVPFLSKNIITSVIKDEVNRQLGF---RFFIWASRRERLR-SRESFGLVIDMLSEDNGCDLYWQTLEELKSG-GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |