FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18 Identity = 59/214 (27.57%), Postives = 105/214 (49.07%), Query Frame = 3 Query: 60 HHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTK----QFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 + D+E +L+ + ++T +V ++L+R + +A RFF WA + H +Y+ ++DIL STK QF ++ D L ++ N + ++ +LR Y L + A + + +P I + LL ALCK VK +H P T+++L G V + +A KL +EM+E + + + ++ C+AG +DEA Sbjct: 109 YDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR59_ARATH (Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana GN=At1g26500 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18 Identity = 60/194 (30.93%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 120 EQVLKRCKNLGFS---AHRFFLWAK-RIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 E L+ C N S HRFFL+++ P F H++ + + ++ I+G+++ L W+ EI + +N + F IVL+ A A + F+ M FG ++ +++ + LCK K V+ A F K P TY +++G DVG+L EA KL++ M++ VDI A ++E + K DEA Sbjct: 78 EFFLQVCNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGL--VNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEA 269
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17 Identity = 55/183 (30.05%), Postives = 99/183 (54.10%), Query Frame = 3 Query: 159 AHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCK-RKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 701 A F +A + P F HS S+ IL+ LG + F L+ D L + R + + + EIF +++ YA A LP + F +M+EF P L+++L L R +++ A + F +++ H P ++Y++L++ +LS A +LF +MLER D+ ++ L++ C+ G ++ A +L Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP375_ARATH (Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 64/233 (27.47%), Postives = 112/233 (48.07%), Query Frame = 3 Query: 57 PHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIE-IRENQ-SFEINPEIFWIVLRAYARANLPNDAIRAFN--RMVEFGIKPS--IYDLDQLLHALCKRKHVKVAHQFFD----NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPLEL 725 P LE +L+ S LV + R + H F WA+ PGF S + +V+ L ++F + W + + +R ++ S ++ + F +++R YARA + AIRAF R E K + + L+ LL ALCK HV+ A + + + P+V+ ++IL+ G +L +A KL++EM ++ + +L+E C+ + A +L E E+ Sbjct: 84 PGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEM 316
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 43/162 (26.54%), Postives = 89/162 (54.94%), Query Frame = 3 Query: 219 YHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 704 Y+ ++D+LG ++F E+ + F +N + + ++L YA A+ ++A+ F R EFGI + LL LC+ KHV+ A F + + EF +K ++++ G +G + EA++ + +++ KC D++++ +++ A+ K G + +A + R Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGF-VNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16 Identity = 53/202 (26.24%), Postives = 99/202 (49.01%), Query Frame = 3 Query: 102 ISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 +S LV ++L R ++ SA WA+ G +HS+ +Y + VDILG K++ + +F+ +R ++ +N ++R +A A +A+ F+R+ EFG++ + ++ LL LCK K V+ A K TP T++I + G + EA EM ++++ +++ C+ + + ML E Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAK--IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSE 284
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP391_ARATH (Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16 Identity = 61/232 (26.29%), Postives = 110/232 (47.41%), Query Frame = 3 Query: 12 DLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVE-FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 701 D + I+ V++ R H E SLN+ +++ V +VL+ + RFF WA+ P + ++ Y L L S K++ +W L ++++ S +I+ E ++ Y + + A+ FN + + G + ++ + LLHALC K A+ + P +TY+ILV G G++ EA++ DEM R + L+E + AG ++ A M+ Sbjct: 46 DYFAAINHVVNIVRREIHP-ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKD-LSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP160_ARATH (Pentatricopeptide repeat-containing protein At2g17525, mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 52/181 (28.73%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 171 FLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 F WA PGF HS +Y L L ++F ++ L E+ ++ + IF ++R + RA L I + + +FGIKPS+ + +L L K + + +A +FF V TY IL++GL + + KL M + + +N+LL A+CK G + A ++ E Sbjct: 63 FRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR9_ARATH (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15 Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 315 NPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 704 N I+ +++ YA++ DAIR +RM++ G KP + +++ LCK V+ A +F + + YS L+ GLG G + EA +LF+EM E+ C D +N+L++A K +DEA + + Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP328_ARATH (Pentatricopeptide repeat-containing protein At4g20740 OS=Arabidopsis thaliana GN=At4g20740 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15 Identity = 57/228 (25.00%), Postives = 109/228 (47.81%), Query Frame = 3 Query: 3 PSADLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNID 683 P A V + R +H P EL+ R++ ++V +VLK + +A +FF WA + G++H +Y+ L F D L E+ ++Q + + F I++R +A + +M +FG KP ++ ++++ AL K + +A +++ K + T+ ILV+GL G + E ++ M E C D+ A+ ++++ + GN+D Sbjct: 93 PIARFVLDAFRKNRNHWGPSVVSELNK---LRRVTPSIVAEVLKLGNDAAVAA-KFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAA-DQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLD 315 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |