FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP422_ARATH (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 57/232 (24.57%), Postives = 110/232 (47.41%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGF-SAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 VS R+ + +LE L + ++ ++ + +VL+RC F S RFF+WA + HSA Y DIL + L+ ++IE + +N + IVL +ANL ++A+ + EF + + ++ + + +A P V TY+ ++ G + G++ +A +L EM + C ++ + ++ +LE +CK+G+++ A +L E Sbjct: 30 VSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLI-KYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAE 260
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 49/206 (23.79%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 99 RISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQS-FEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF--TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 R+ + ++ + +N+ + F K PGF H+ +YH ++ L + F + + ++R + + +F +LR Y A ++R F R+ +FG+K S+ L+ LL+ L + + + H F N+K F TP + T ++LV+ L ++ A K+ DE+ +++ + ++L G+++ A +L E Sbjct: 46 RLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251 HSP 2 Score: 78.5666 bits (192), Expect = 3.922e-14 Identity = 48/168 (28.57%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 216 SYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPL 719 +Y +++ L K+ + E+ E +SF + + V+ A + ++A + +M++ P L L+H LCK V A + FD + P++ TY+ L+ G+ + GEL+EA +L+D+M ERKC + +N L+E + K GN+ E +L E + + Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLE-RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP130_ARATH (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 54/211 (25.59%), Postives = 93/211 (44.08%), Query Frame = 3 Query: 159 AHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEI--RENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK---HEFTPTVKTYSILVRGLGDVG-----------ELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE-----CVPLELS 728 A FF W + GF+H+ + + +L F LWDFL ++ REN + +++ +A+ F RM E+ KP +Y + +++ALC+ + K A D + + P TY+IL+ G + EA ++F EML R D++ +N L++ CK I A + + CVP +++ Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR92_ARATH (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14 Identity = 41/131 (31.30%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 336 VLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPLEL 725 ++ + R N +DA+ ++MVE G KP I + ++ +LCK K V A FF + + P V TY+ LV GL + S+A +L +M+++K +++ +++LL+A K G + EA + E V + + Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291 HSP 2 Score: 78.1814 bits (191), Expect = 5.122e-14 Identity = 46/172 (26.74%), Postives = 86/172 (50.00%), Query Frame = 3 Query: 195 GFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 G++ +Y+ ++D L TK+ +DF EI E + N + ++ ++ +DA R + M++ I P++ LL A K V A + F+ + P + TYS L+ GL + EA ++FD M+ + C D++++N+L+ CKA +++ + RE Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14 Identity = 57/202 (28.22%), Postives = 104/202 (51.49%), Query Frame = 3 Query: 90 FTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVE-FGIKPSIYDLDQLLHALCKRKH-VKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 F +S V ++LK KN +A F A R PG+ HSA YH ++ L T+ + ++E+ +Q + + ++ V++ Y + ++P+ A+ F RM E FG +P+I + LL+A + K VKV F P ++TY++L++ E +AR D M + D+ ++++++ + KAG +D+A Sbjct: 4 FPKSLSPKHVLKLLKSEKNPR-AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV-SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203 HSP 2 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 43/166 (25.90%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 216 SYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT--PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 +Y++L+ + K+F FL + + F+ + + V+ A+A +DA+ F+ M E G+ P + + L+ K K K A + +D + + P VKT++I++ GL G + + K+++ M + + D+ ++SL+ +C AGN+D+A + E Sbjct: 151 TYNVLIKMSCKKKEFEKARGFL-DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14 Identity = 53/208 (25.48%), Postives = 92/208 (44.23%), Query Frame = 3 Query: 195 GFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEF-----------------------------------GIKPSIYDLDQLLHALCKRKHVKVAHQ--FFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 G+ H S+ +V L S +F D ++ ++ ++ ++ +I + R Y R + P D++R F++M +F G+ P++ L+ L+ ALC+ A F + K P TY L+ GL G + EA+KLF EM+E+ C ++ + SL+ +C + N+DEA L E Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKI-ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14 Identity = 56/211 (26.54%), Postives = 105/211 (49.76%), Query Frame = 3 Query: 96 PRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGF--EHSAGSYHILVDIL---GSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFD-NAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLER-KCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 P I T + ++K C G + LW + I GF + + +Y+ LV G+ + ++ + EI N + ++ +A+ + A+ +N+M+ G P++ ++ ALC+ K A + +K P+V T++ ++GL D G L A K+F +M ++ +CP +I+ +N LL+ + KA I+EA+G+ RE Sbjct: 314 PNIYT--LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI----GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518 HSP 2 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 41/175 (23.43%), Postives = 89/175 (50.86%), Query Frame = 3 Query: 198 FEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPL 719 F+H+ ++ +++ L Q + +L++ + Q F + ++F V+ Y + L A+ F R+ EFG PS+ + +L L +++ + + + K + F P V TY++L++ L ++ A+KL EM + C D +++ +++ +MC+ G + E + P+ Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSV-QYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV 245
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR11_ARATH (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana GN=At1g05600 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 56/205 (27.32%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 96 PRIST-NLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH--EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML 701 PR+ T +L+ Q+LK+ KN + F +R P + H+ Y ++DILG + + L ++IE + S E +F V+R ++RA DAI F + EF D LL + K ++ A F + E + ++L++ L V A ++F EM + C D ++ L++ C G ++EA +L Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNR-VLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLL 210
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP412_ARATH (Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.737e-14 Identity = 50/182 (27.47%), Postives = 88/182 (48.35%), Query Frame = 3 Query: 186 RIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAK-HEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPLELS 728 +I G H + ++L++ + Q L FL ++ + FE + F ++ + N +A+ N+MVE GIKP + ++ +LCK HV A FD + + P V Y+ LV GL + G +A L M +RK D++ N+L++A K G +A + E + + ++ Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK-LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279 HSP 2 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 41/129 (31.78%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 315 NPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEF---TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 N + +++ + + PN A F+ MV G+ P+I + LLH LC VK A F D K E P + TY++L+ GL G+L +A +F++M +R+ + I+ + +++ MCKAG + A Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13 Identity = 45/174 (25.86%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 195 GFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECV 713 GF H SY L+ L ++ F + D ++ + ++ +F +++ Y +A + AI F+++ F +I L+ L++ L ++ A FFD AK P +++IL++G D + A K+FDEMLE + ++ +NSL+ +C+ ++ +A +L + + Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAV-DQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI 248 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |