FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13 Identity = 63/262 (24.05%), Postives = 105/262 (40.08%), Query Frame = 3 Query: 66 DLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQS-------FEI----------NPEIFWIVLRAYARANLPNDAIRAFNR-----------------------------------MVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAH 692 +L + + P + + +VL R ++ A FF W K G + G+Y +L+ IL S+K+F L FL E+ E S F + +P +F ++++ Y + L + R F M GI P+ Y + L + C + + F + + E F P + TY+ LV G L EA L+ M R+ D++ + SL++ +CK G + EAH Sbjct: 65 NLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH 326
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP291_ARATH (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13 Identity = 54/231 (23.38%), Postives = 106/231 (45.89%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTP--RISTNLVEQVLKR---CKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVE--FGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 + I+ +++ H P+H ++ L P +S V +VL R + G A FF ++ + ++ S+ + IL + F W + E+R++ ++ + I+L A+ + + AF +M + F K + + + LL A C + +K A F+ F P VKT +IL+ G + G+++ + EM++R + + + ++ CK N EA Sbjct: 34 IERITIIINGHPFPNHPIQPILAKHIPLSSLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEA 264
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13 Identity = 48/173 (27.75%), Postives = 83/173 (47.98%), Query Frame = 3 Query: 198 FEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA----HGMLR 704 F +S Y I++ LG +K F L L+ ++ + IF V+ + R LP+ A+ F+ M ++ + ++ L+ LL AL K ++ + + P TY+IL+ G G +A KLFDEM+++K + +L+ +CK + EA H ML+ Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLK 215 HSP 2 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 333 IVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFT------PTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 I++ +++ +DA++ F+ MV+ +KP+ L+H LCK VK A + KH+ PTV Y+ L++ L +GELS A KL DE E K VD +++L+ ++ KAG +E +L E Sbjct: 157 ILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM----KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEE 283
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP136_ARATH (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 50/189 (26.46%), Postives = 96/189 (50.79%), Query Frame = 3 Query: 159 AHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIK--PSIYDLDQLLHALCKRKHVKVAHQ--FFDN--AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 A FF W +R GF H+ +++ ++DILG +F + W + + N N F IV + Y A+L +AI A++++ +F ++ S Y+ L+ ALC+ KHV A + F N K +++++RG +G + ++ + +M D+ +++ ++ MCK+G +A + +E Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN---LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKE 249
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05665, mitochondrial OS=Arabidopsis thaliana GN=At1g05665 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 49/178 (27.53%), Postives = 84/178 (47.19%), Query Frame = 3 Query: 159 AHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 AH L + + G+ SY +V+ + +W LIE+ + + + N I+ ++ R +A AF+ M+ GI P L+ CKR ++ A +FF + + TP V TY+ ++ G +G++ EA KLF EM + D + L+ CKAG++ +A Sbjct: 265 AHHLLLLME-LKGYTPDVISYSTVVNGYCRFGELDKVWK-LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440 HSP 2 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 327 FWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 F ++ Y +A DA R N M++ G P++ L+ LCK + A++ K P + TY+ +V GL G + EA KL E D + + +L++A CK+G +D+A +L+E Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP439_ARATH (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana GN=At5g61370 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 60/243 (24.69%), Postives = 107/243 (44.03%), Query Frame = 3 Query: 6 SADLVSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAH--RFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPT-VKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPLEL 725 S + E+ R++S DLE +LN + S+NLV QV++ CKN RFF W+ + G ++ ++ +L K + L ++R+ ++ ++ + F IV + DAI F + +F + + ++ ALC R HVK A + K + + Y L+ G + EAR++ +M D+ NSLL +C+ G++ E + + L Sbjct: 33 SETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRK-ENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 63/254 (24.80%), Postives = 117/254 (46.06%), Query Frame = 3 Query: 18 VSEISRVLSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQF----ALLWDFLIE-IRENQSFEI-----------NPEIFWIVLRAYARANLPNDAIRAFNRMV-EFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECVPLEL 725 V + R++ R ++ LS + R+ T VE++L + RFF + GF+HS S+ IL+ L F +LL L+ ++ + F + + F ++++ Y R+ D + F M+ + + P + L LLH L K +H +A + F D P V Y+ ++R L ++ +LS A+++ M C V+I+ +N L++ +CK + EA G+ ++ +L Sbjct: 42 VDAVKRIVRGKRS--WEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 41/134 (30.60%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 333 IVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKH-EFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE-----CVP 716 ++++ Y++ ++AI+ + M+E G +P + ++ L++ L K V A + F K + PTV TY+ L+ GLG G++ EA +LF+ M+++ CP + + N+L + +CK + A ML + CVP Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP 641
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 48/175 (27.43%), Postives = 85/175 (48.57%), Query Frame = 3 Query: 186 RIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 R G + + SY ILVD + ++ L E+ + + N F ++ A+ + + +A+ F M G KP +Y + L+ LC+ +K A D TY+ L+ GE+ EARKL +EM+ + P+D + +NSL++ +C+AG +D+A + + Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589 HSP 2 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 52/224 (23.21%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 66 DLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVE-FGIKPSIYDLDQLLHALCKRK-HVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE-----CVP 716 DL+ N+F +I+ + ++L+ N+ S F W G+ HS Y +L+ LG+ +F + LI++++ + +F ++R Y +A P R M + +P+ + +L L H A+ F+D + PT+ T+ ++++ V E+ A L +M + C + + + +L+ ++ K ++EA +L E CVP Sbjct: 65 DLDSLRNSFH-KITPFQLYKLLELPLNVSTSME-LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKD-EGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 59/238 (24.79%), Postives = 99/238 (41.60%), Query Frame = 3 Query: 117 VEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSY----HILV-------------------------DILGSTKQ--------FALLWDFLIEI----------RENQSFEINPEIFWI--VLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNI 680 V +VL K A +FF W+ GF+HS SY HIL D+L ST+ F L+ LI++ + + F + P+ +L +A+ +D R F M+ G +P+++ + ++ +CK V+ A F+ K P TY+ ++ G G VG L + F+EM + C D++ +N+L+ CK G + Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |