FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 54/206 (26.21%), Postives = 95/206 (46.12%), Query Frame = 3 Query: 81 LNTFTPRISTNLVEQVLKRC-KNLGFS--------AHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCK 668 L+ R+S LV +VL +NL + A+RFFLW+ F H+ SYH+L+ I ++ +W + E+ ++ F F +++ + A L A+ F + F +P + + +L++L K K+ + + F+P V TY+IL+ +G++ +LFDEM D +N LL + K Sbjct: 97 LDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQD-GFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGK 301
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 50/224 (22.32%), Postives = 105/224 (46.88%), Query Frame = 3 Query: 39 LSDHRDPHHDLELSLNTFTPRISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 + D+R L+ S+ P +LV VL K L A +FF W +R H ++ ++ +LG + L+++ E + + ++F +++ +Y +A + ++++ F +M + G++ +I + L + +R +A ++F+ E PT TY++++ G L A + F++M R D N+++ C+ +DEA + E Sbjct: 94 MMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEH-ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPE-KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVE 315
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12 Identity = 44/152 (28.95%), Postives = 71/152 (46.71%), Query Frame = 3 Query: 279 LIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML-----RECVP 716 L++ E E + I+ ++ A NDA+ F M GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA KL+DEM++R DI ++SL+ C +DEA M ++C P Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP389_ARATH (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12 Identity = 50/183 (27.32%), Postives = 89/183 (48.63%), Query Frame = 3 Query: 171 FLWAK-RIPGFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECV 713 +LW + ++ G H+ + +IL++ Q +L FL ++ + E + F +L + R + DA+ F++MV G KP++ + ++ LCK K V A + K P V TY+ L+ GL G S+A ++ M +R+ D+ N+L++A K G + EA E + Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIK-LGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 333 IVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 I++ Y + N A+ M E G P L++AL K K + A++ F K F + + Y+++++ G G+LSEA LF+EM + D+ A+N+L+ M KAG I+EA+ +LR+ Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12 Identity = 47/180 (26.11%), Postives = 85/180 (47.22%), Query Frame = 3 Query: 195 GFEHSAGSYHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML-----RECVP 716 G + + +Y ++V+ L L ++ L ++ E E N I+ V+ + + +DA+ F M G++P++ L+ LC + A + D + + P V T++ L+ G+L EA KL+DEM++R DI ++SL+ C +DEA M ++C P Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 42/152 (27.63%), Postives = 72/152 (47.37%), Query Frame = 3 Query: 279 LIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML-----RECVP 716 L+ E E + I+ V+ + + +DA+ F M GI+P ++ L+ LC A + D + + P V T++ L+ G+L EA KLFDEM++R +I+ +NSL+ C +DEA + ++C+P Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR76_ARATH (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 3 Query: 336 VLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEF-TPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 +L + A +AI +++ E G+ + + AL K K + H F+ K + +P + TY+IL+ G VGE+ EA +F+E+ C DI+++NSL+ + K G++DEAH +E Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537 HSP 2 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 46/160 (28.75%), Postives = 78/160 (48.75%), Query Frame = 3 Query: 219 YHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFW--IVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 Y+ + LG KQ + + D +++++ +P+IF I++ ++ R ++AI F + KP I + L++ L K V AH F + + P V TYS L+ G + A LF+EML + C +I+ +N LL+ + K G EA Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGP---SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP238_ARATH (Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 39/129 (30.23%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 306 FEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 FE + F +L Y N DAI F++++ G KP++ L+ LCK +H+ A + F+ + P V TY+ LV GL ++G +A L +M++R+ +++ +L++A K G + EA Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 44/152 (28.95%), Postives = 70/152 (46.05%), Query Frame = 3 Query: 279 LIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFF-DNAKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGML-----RECVP 716 L++ E E I+ ++ A NDA+ F M GI+P++ + L+ LC A + D + + P V T+S L+ G+L EA KL+DEM++R DI ++SL+ C +DEA M ++C P Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394 HSP 2 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 42/164 (25.61%), Postives = 78/164 (47.56%), Query Frame = 3 Query: 219 YHILVDILGSTKQFALLWDFLIEIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNA-KHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRE 707 Y+ ++D L + K + E+ +N+ N + ++R +DA R + M+E I P++ L+ A K + A + +D K P + TYS L+ G L EA+ +F+ M+ + C +++ +N+L++ CKA +DE + RE Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |