FC930785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 36/126 (28.57%), Postives = 65/126 (51.59%), Query Frame = 3 Query: 315 NPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDN-AKHEFTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEA 689 N F I++ Y +ANL +D + F +M G+ + L+ C+ ++VA + F P + +Y IL+ GL D GE +A ++F+++ + K +DI +N ++ MC A +D+A Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP380_ARATH (Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.923e-11 Identity = 38/144 (26.39%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 285 EIRENQSFEINPEIFWIVLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTP-TVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLRECV 713 E+ ++ + + + +++ +A ++ A M + G+ P + + L+ A CK + ++ A + +D E + TY++L+R L + GE E+ +LFD+MLER D + SL+E +CK I+ A + R+C+ Sbjct: 386 ELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCM 529
BLAST of FC930785 vs. ExPASy Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 3 Query: 318 PEIFWI--VLRAYARANLPNDAIRAFNRMVEFGIKPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHE-FTPTVKTYSILVRGLGDVGELSEARKLFDEMLERKCPVDILAHNSLLEAMCKAGNIDEAHGMLR 704 P++F ++ + + N +DA R +RM P + ++ +LC R + +A + + + PTV TY+IL+ G + EA KL DEML R D+ +N+++ MCK G +D A M+R Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVR 287 The following BLAST results are available for this feature:
BLAST of FC930785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930785 ID=FC930785; Name=FC930785; organism=Citrus clementina; type=EST; length=733bpback to top |