FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19
Identity = 59/193 (30.57%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L    A+VT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +GL VTG+VC V     R+ L+ T  +L +G ++I V+N   +      ++   E +  ++  N ++   + +   P +   G  S+V+++S       +    Y+ +K A+  L KNLA E A  NIR N +AP  I+T F++
Sbjct:   12 LANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALNL-HGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSK 203          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   94 SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            S     R  L    ALVT  T G+G A+   L+  GA V   SR +  +++ +  LQ +GL VTG+VC V     R+ L+ T   L +G ++I V+N   +    +L +   E +   +  N ++   + +   P +   G  S+V++SS      +   + Y+ +K A+  L K LA E A  NIR N +AP  I+T F+
Sbjct:    3 SSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFS 202          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18
Identity = 64/192 (33.33%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAAS-----IVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            ALVTG T G+GLA+   L+ LGA    C+R E  L + +  L+ +G  V G+VCDV+   Q +  +      + G ++I VNN G S    T E   E +  V++TN  S F    +   +L A G  +     I+ ++S  G         YSA+K  +  L K L  E A+  I  N+V P ++ TP  E
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRY-GTVDILVNNAGRSGGGATAEIADELWLDVITTNLTSVF---LMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAE 207          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 62/192 (32.29%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTL-EYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            L    ALVT  T G+G A+   L+  GA V   SR +  ++  +  LQ +GL VTG VC V     R+ LI T      G ++I V+N   +     L +   E +  V+S N  +   + +   P +   G  S+V++ S  G         Y+ +K A+  L KN A E A  NIR N +AP  I+T F+
Sbjct:   12 LSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRFS 202          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 1
Query:   94 SHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            S     R  L    ALVT  T G+G A+   L+  GA V   SR +  +++ +  LQ +GL VTG+VC V     R+ L+ T   L +G ++I V+N   +      ++   E +   +  N ++   + +   P +   G  S+V++SS      +   + Y+ +K A+  L K LA E A  NIR N +AP  I+T F+
Sbjct:    3 SSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFS 202          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18
Identity = 62/199 (31.16%), Postives = 103/199 (51.76%), Query Frame = 1
Query:  106 QNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTS-VLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGI-VSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            + R  L+   ALVT  T G+GLA+   L+  GA V   SR +  ++  +  LQ +GL VTG+VC V     R+ L+    +L +G ++I V+N   +      ++   E +  ++  N ++   + +   P +   G  S++++SS        N+G  Y+ +K A+  L KNLA E A  NIR N +AP  I+T F++
Sbjct:    7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL-HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP-YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ 203          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.239e-18
Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L+G   L+TG   G+G A     +  GATV     ++  L+  +   +    KV   V +V+ R Q + ++  V   + G++++ VNN G +     +    ED+  V++ N +  F++ Q+  P +      SIV +SS +GI      T Y+A+K  +  + K  A E A  NIR N+VAP +I TP TE
Sbjct:    3 LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLNVTDRDQIKEVVEKVVQKY-GRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTE 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: PECR_HUMAN (Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sapiens GN=PECR PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 64/195 (32.82%), Postives = 91/195 (46.67%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-----MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG---TVYS-ATKGAMNQLAKNLACEWAKDNIRTNSVAPWYI 678
            LQG  A+VTGG  G+G A+V+EL  LG+ V   SR    L      LQ      K  +V    C++ +  +   L+ +    F GK+N  VNN G   L P    +++ +  V+ TN    F++C+  +         SIV +     IV    G    V+S A +  +  L K+LA EWA   IR N VAP  I
Sbjct:   16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNI-----IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI 204          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 61/195 (31.28%), Postives = 103/195 (52.82%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLF-NGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +SL+G TALVTG   G+G  + + L+  GA +   S T + L+E    ++ +G   T    D+S   + + + ++ + LF N +++I VNN G    +   ++  E++  V++ N  S F L QLA   +   G   I+ ++S L      +   Y+A+K A+  L K+ A EWA   I+ N++AP YI T  T+
Sbjct:    8 FSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSS-LSETQQLVEQEGRIFTSFTLDMS---KPEAIKDSAAELFENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTK 198          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: UCPA_ECOLI (Oxidoreductase ucpA OS=Escherichia coli (strain K12) GN=ucpA PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 59/193 (30.57%), Postives = 93/193 (48.19%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L G TAL+TG  +G+G  +    +  GA +        E+ +    L  +G + T  V DV         I        G+++I VNN G   L   L+ + +D    +  N +  +++ +   P + A     IV+MSS  G + A+ G T Y+ TK A+  L K+LA E+A+  IR N++ P Y+RTP  E
Sbjct:    4 LTGKTALITGALQGIGEGIARTFARHGANLILLD-ISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE 194          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
DHRS4_RABIT8.357e-1930.57Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
DHRS4_PONAB2.431e-1830.85Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
DHK1_STRVN2.431e-1833.33Granaticin polyketide synthase putative ketoacyl r... [more]
DHRS4_MOUSE3.176e-1832.29Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]
DHRS4_HUMAN3.176e-1830.35Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
DHRS4_PIG5.417e-1831.16Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
FABG_THEMA9.239e-1830.733-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
PECR_HUMAN2.058e-1732.82Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sa... [more]
KDUD_BACSU4.585e-1731.282-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
UCPA_ECOLI5.989e-1730.57Oxidoreductase ucpA OS=Escherichia coli (strain K1... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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