FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y1430_HAEIN (Probable NADP-dependent dehydrogenase HI1430 OS=Haemophilus influenzae GN=HI1430 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 53/182 (29.12%), Postives = 84/182 (46.15%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNG--KLNIFVNNVGTSV-LKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAP 669
            TALVTG T G GLA+ ++L   G  V    R    L E    L    L +   + D       Q  IN +++L  G   +++ VNN G ++ L+P  + + +D+  ++ TN +    + +L  P + A     I+ +SS  G        VY  TK  + Q + NL  + A   IR ++V P
Sbjct:    5 TALVTGATAGFGLAICKKLIEAGYKVIGTGRRADRLAEIHSQLGNNFLPLAFDIRD------EQATINALNTLPEGWQAVDLLVNNAGLALGLEPAHKADLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLSSIAGTYPYAGSNVYGGTKAFVTQFSLNLRADLAGTKIRVSNVEP 180          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 57/195 (29.23%), Postives = 91/195 (46.67%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLC-QLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            + L G  ALVTG + G+G A+   L   GA V        +L      L   G +V     ++S+R + + L     +   G ++I VNN G +     +  +  D+  V+  N  + F L  +L HP++R      I+ ++S +G+      T Y A+K  M   +K+LA E A  NI  N VAP +I +  T+
Sbjct:    2 FELTGRKALVTGASGGIGEAIARVLHAQGAIVGLHGTRVEKLETLAAEL---GDRVKLFPANLSNRDEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDADWDTVLEVNLTAVFRLTRELTHPMMRRR-HGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTD 191          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 57/194 (29.38%), Postives = 80/194 (41.24%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPL--LRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L G T +VTGG  G+G A VE L   GA V      + E  E +  +   G K     CD++     + L+    + F G    F N        P  E + E F   M  N    F LC     L  +      SIV  +SA G+V   +   Y   K A+  L +  A ++ K  IR N++ P  +RTP  +
Sbjct:    4 LSGKTIIVTGGGSGIGRATVELLVASGANVPVADIND-EAGEAV--VATSGGKAAYFRCDIAQEEDVKALVAQTLAAFGGLDGSFNNAAIPQAGLPLAEVSLERFRQSMDINVTGTF-LCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQ 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 47/188 (25.00%), Postives = 92/188 (48.94%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            +ALVTG ++G+G ++  +L+  G  V    + ++ +    +  ++ KG++      +V+   + + +I  V S F G +++ VNN G +     +    +++  V+ TN +  F+  Q   P +    + +I+ ++S +G +       Y ATK  +  L K  A E A   I  N+VAP +I +  T
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMT 190          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 47/188 (25.00%), Postives = 92/188 (48.94%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            +ALVTG ++G+G ++  +L+  G  V    + ++ +    +  ++ KG++      +V+   + + +I  V S F G +++ VNN G +     +    +++  V+ TN +  F+  Q   P +    + +I+ ++S +G +       Y ATK  +  L K  A E A   I  N+VAP +I +  T
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMT 190          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 54/208 (25.96%), Postives = 88/208 (42.31%), Query Frame = 1
Query:   73 AQPQQTESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            AQ    E  S     S++    +VTG ++G+G A+   L   G  V    +R+  E  E    ++  G +      DVS     + +I T    + G ++I VNN G +     +      +  V+  N    F   Q A  ++       I+ ++S +G+V       YSA K  +    K +A E+A  NI  N+VAP +I +  T
Sbjct:   59 AQVATAEKVSAGAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAW-GTVDILVNNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMT 265          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS7_MOUSE (Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 58/214 (27.10%), Postives = 92/214 (42.99%), Query Frame = 1
Query:   91 ESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNE----CIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHL--CQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAK------DNIRTNSVAPWYIRTPFTE 696
            E   R+  W L  M   VTG + G+G  +  +LS LG ++   +R   EL      C+ +  +K   +     D++     +     V   F GK++I VNN G S     LE N + F  +++ N+     L  C L H + R  G   IV ++S  GI S ++ + Y A+K A+      L  E  +       N+    V    ++  FTE
Sbjct:   38 EWQGRRPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEF-GKIDILVNNGGRSQRSLVLETNLDVFKELINLNYIGTVSLTKCVLPHMIERKQG--KIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSELGQYPGITFCNVYPGPVQSDIVKNAFTE 248          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHRS7_ANOGA (Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 58/208 (27.88%), Postives = 90/208 (43.27%), Query Frame = 1
Query:   88 TESHSRQNRWSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSV---------CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            T    ++N   L G   L+TG + GLG A+     + G  V   +R + EL      L    L++  +V          D+S        + +V  + +G ++I VNN G SV    L    +    +M  N+  +  L +   P + A     IV +SS  G  +    + YSA+K AM     +L  E AKDNI+   ++P YI T
Sbjct:   35 TMMKEQRNARHLNGKVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRKDL----LELHATVPTHPPIILPLDLSDLNSIGGKVQSVLEI-HGAIDILVNNGGISVRGDALSTAIDVDIRIMLVNYFGSVALTKACLPSMMARKEGRIVSISSVQGKFAIPHRSAYSASKHAMQAFCDSLRAEVAKDNIKVTLISPGYINT 237          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: NODG_AZOBR (Nodulation protein G OS=Azospirillum brasilense GN=nodG PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 53/184 (28.80%), Postives = 82/184 (44.57%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            ALVTG   GLG A+ + L+  G  V   C          +   +  G K   +  DVS     + ++  + +   G ++I VNN G +  K   + +   +  V++TN  S F++ Q   P +   G   I+ +SS  G+      T YSA K  +    K LA E A   +  N++AP YI T
Sbjct:    6 ALVTGAMGGLGTAICQALAKDGCIVAANCLPNFEPAAAWLGQQEALGFKFYVAEGDVSDFESCKAMVAKIEADL-GPVDILVNNAGITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMAERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAELATKGVTVNAIAPGYIGT 188          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11
Identity = 54/194 (27.84%), Postives = 91/194 (46.91%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVV----EELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            L+    +VTGG+KGLG A+     +E S +     +      E+ + I     + + V G   DV+       L+ T    F G L++ +NN G     P+ E + E+++ V+ TN   AF   + A      +    +++ MSS   ++   +   Y+A+KG M  + + LA E+A   IR N++ P  I TP
Sbjct:    5 LKDKVVVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRG---DVTKEEDVVNLVETAVKEF-GSLDVMINNAGVENPVPSHELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTP 194          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
Y1430_HAEIN6.413e-1129.12Probable NADP-dependent dehydrogenase HI1430 OS=Ha... [more]
NODG_RHIS36.413e-1129.23Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
LINC_PSEPA6.413e-1129.382,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
FABG_STAES6.413e-1125.003-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ6.413e-1125.003-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_CUPLA6.413e-1125.963-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
DHRS7_MOUSE6.413e-1127.10Dehydrogenase/reductase SDR family member 7 OS=Mus... [more]
DHRS7_ANOGA6.413e-1127.88Dehydrogenase/reductase SDR family protein 7-like ... [more]
NODG_AZOBR8.376e-1128.80Nodulation protein G OS=Azospirillum brasilense GN... [more]
DHG2_BACME8.376e-1127.84Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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