FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 56/193 (29.02%), Postives = 90/193 (46.63%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +L   T L+TGG  G+G A V+      A V      E +    I       L    +  D++  P  Q  I +    F G L++ +NN G  ++ P  E    +++ V++ N    F + + A   +  SG  +I+   S  G+V+      Y+A+KG + QL +++A ++AK NIR N V P  I TP  E
Sbjct:    2 NLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHT--DITDEPACQNAIRSAVDKFGG-LDVLINNAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNE 191          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: ARDH_CANTR (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida tropicalis GN=ARD PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 58/206 (28.16%), Postives = 97/206 (47.09%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVH----TCSRTETELNECIH--HLQMKGL------KVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-LAHPLLRASGAASIVLMSSALGIV--SANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            L G   ++TGG+ GL   V   L   GA +        RT+    + +     QMKG       +V+   C++      +     ++       ++ +N  G +   P  EY A++   +M  N   +F++ Q  A PL++ +   SI+L+ S  G +        +Y+ +K  +  LA++LACEWAK NIR N+++P YI TP T
Sbjct:   18 LDGKLVIITGGSGGLSAVVSRALLAKGADIALIDMNLERTQQAARDVLQWGEEQMKGKHESPIGQVSAWSCNIGDAEAVELTFKAINEHHGKVASVLINTAGYAENFPAEEYPAKNAENIMKVNGLGSFYVSQAFARPLIQNNMTGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTLSPGYILTPLT 223          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DCXR_BOVIN (L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVL-MSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            L G  ALVTG  KG+G ++V+ L   GA V   SRT+ +L+  +   +  G++   +VC D++     +  +  V     G +++ VNN   + L+P LE   E + +  S N  +   + Q+    L A GA  +++ +SS          +VY +TKGA++ L K +A E     IR N+V P  + TP
Sbjct:    5 LAGRRALVTGAGKGIGRSIVKALHAAGARVVAVSRTQADLDSLVR--ECPGVE---TVCVDLADWEATEQALGGV-----GPVDLLVNNAAVAFLQPFLEVTKEAYDMSFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSSQASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIRVNAVNPTVVMTP 185          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y0585_STAHJ (Uncharacterized oxidoreductase SH0585 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0585 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 52/192 (27.08%), Postives = 88/192 (45.83%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L G  A++TG + G+G A  + L   G  V    R+  +LN     +    + +  +  DV+++ +   L+  V  +F G ++IFVN  G        +Y  E +  ++ TN +   +      P   A G+  +V ++S      +    +YSATK A+  +   L  E AK  I+T S+ P  + TP TE
Sbjct:    4 LNGRVAIITGASSGIGAATAKALEKQGVKVVLAGRSHDKLNTLAKDMNEDNIHIVPT--DVTNQVEVDALVAKVIDVF-GHVDIFVNCAGVMRSSKITDYQVESWDSMVDTNIKGLLYSLNAILPKFEAQGSGHVVNLASISANEVSKESALYSATKSAVLMIFNGLEKELAKTGIKTTSILPGMVDTPMTE 192          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: HDHA_ECOLI (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli (strain K12) GN=hdhA PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 55/189 (29.10%), Postives = 89/189 (47.09%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            L G  A++TG   G+G  +    +  GA+V          N  +  +Q  G +     CD++S  +   L +   S   GK++I VNN G    KP  +    DF      N  S FHL QL  P +  +G   ++L  +++   + N+  T Y+++K A + L +N+A +  + NIR N +AP  I T
Sbjct:    9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG-VILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILT 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: HDHA_ECO57 (7-alpha-hydroxysteroid dehydrogenase OS=Escherichia coli O157:H7 GN=hdhA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 55/189 (29.10%), Postives = 89/189 (47.09%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVG-TVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            L G  A++TG   G+G  +    +  GA+V          N  +  +Q  G +     CD++S  +   L +   S   GK++I VNN G    KP  +    DF      N  S FHL QL  P +  +G   ++L  +++   + N+  T Y+++K A + L +N+A +  + NIR N +AP  I T
Sbjct:    9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG-VILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILT 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 58/186 (31.18%), Postives = 85/186 (45.70%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            ALVTG T G+GL +   L   G  V  C+R E  L   +  L+  G++  G  CDV S P+ + L+  V   + G +++ VNN G      T E   E +  V+ TN    F + +  L    +   G   IV ++S  G         YSA+K  +    K L  E A+  I  N+V P ++ TP
Sbjct:    9 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 193          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 57/192 (29.69%), Postives = 85/192 (44.27%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-----GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGA----MNQLAKNLACEWAKDNIRTNSVAP 669
            LQ   A+VTGG  G+G A+  EL  LG  V   SR    L   +  L+         +VT   C++    +   L+ +  + + GK+N  VNN G   + P  +  A+ +  V+ TN    F++C+  +         SIV +     IV  N G   +A  GA    +  L K +A  WA   +R N VAP
Sbjct:   16 LQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKY-GKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMCKAVYNSWMKDHGGSIVNI-----IVLLNNGFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCVAP 201          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 51/192 (26.56%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQ-MKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            LQ   A+VTG + G+G ++ E L+  G  V    R E+ L E    +Q  K   V  S+ DV+ + +   L+      F G+++I VN+ G  +     E + E +  ++  N +   +      P +    +  I+ ++S  G       T+YSA+K A++ + + L  E AK  +R  S++P  + TP +
Sbjct:    4 LQDKVAVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQDNKQAVVETSIVDVTHKEEVTELVEKTKEKF-GQIDILVNSAGLMLSSAITEGDVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPLS 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 56/199 (28.14%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  133 TALVTGGTKGLGLAVVEELSMLGATVHTCS-------RTETELNECIHHLQMKGLKVTGSV----CDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            TA++TG T G+GLA+   L+  GA +           RT T+        ++ GL  +G+V     D++   +   ++  V+  F G  +I VNN G   ++   ++  E +  +++ N  S+FH  + A P ++  G   I+ ++SA G+V++   + Y A K  +  L K +A E A+  +  NS+ P Y+ TP  E
Sbjct:    4 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD--------EVAGLS-SGTVLHHPADMTKPSEIADMMAMVADRFGGA-DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE 192          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BACC2_BACSU5.070e-1629.02Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
ARDH_CANTR1.129e-1528.16D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
DCXR_BOVIN1.475e-1530.89L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV... [more]
Y0585_STAHJ1.927e-1527.08Uncharacterized oxidoreductase SH0585 OS=Staphyloc... [more]
HDHA_ECOLI1.927e-1529.107-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
HDHA_ECO571.927e-1529.107-alpha-hydroxysteroid dehydrogenase OS=Escherichi... [more]
ACT3_STRCO1.927e-1531.18Putative ketoacyl reductase OS=Streptomyces coelic... [more]
PECR_RAT2.516e-1529.69Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
Y0419_STAS13.286e-1526.56Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
BDHA_RHIME3.286e-1528.14D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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