FC930789

Overview
NameFC930789
Unique NameFC930789
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 47/186 (25.27%), Postives = 87/186 (46.77%), Query Frame = 1
Query:  136 ALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            A+VTG   G+G A+   L   GA V    R + +L    + L    +KV  +  DV+ + +   LI      F G L+I +N+ G  +     +Y  +++  ++  N +   +  + A P +    +  ++ ++S  G       T+YSATK A++ + + L  E AK  ++  S++P  + T  T
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTKKEEVDELIKMAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT 191          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 60/192 (31.25%), Postives = 88/192 (45.83%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHT-CSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            L+G  A+VTG +KG+G A+ + L+  GA V    + ++   +  +  +   G K      DVS   Q + L+      F G+L++ VNN G        E   E +  +   N        Q A   L   G  SI+ +SS +  V      VYS TKGA+N ++  LA E A   IR N V+P Y+ T  T
Sbjct:    4 LEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQF-GRLDVLVNNSGVYEFAAIEEVTEEHYRRIFDVNVLGVLLATQAASKHLGEGG--SIINISSVVTDVLMPTSAVYSGTKGALNAISGVLANELAPRKIRVNVVSPGYVVTEGT 192          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ--LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            +L G   +VTGG++G+GL +V+     GA V      E      I  L   G +V+ +  DVS     +  +       N K++I VNN G +     +  + +D+  V+STN  S ++ C   + H +   SG  SI+ ++S +  + +   T Y+A K  +    K+LA E A  NIR N +AP +I T  T
Sbjct:    4 TLVGKKVIVTGGSRGIGLGIVKLFLENGADVEIWGLNEERGQAVIESLTGLGGEVSFARVDVSHNGGVKDCVQKFLDKHN-KIDILVNNAGITRDNLLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSG--SIINVASIVAKIGSAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMT 194          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 62/201 (30.85%), Postives = 92/201 (45.77%), Query Frame = 1
Query:  121 LQGMTALVTGGT--KGLGLAVVEELSMLGATVHTCSRTETELNEC------IHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANV--GTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFT 693
            L+G TA+++G    +G+G A  E  +  GA V        E          + H    GL+     CDV+ R    +  + V S F G  NI +NN G +    TL+ +  D+  +++ N     +L Q+  P +R +G  SI  MSS        +  G  YSA K  +  LAK +A E+  D+IR N V P  I+T  T
Sbjct:    3 LKGKTAVISGAASKRGIGRATAELFASHGARVAILDINADEAKAAAGDLPPVEHGAHIGLR-----CDVADRASCTSASDEVLSAF-GVANILINNAGITQPVKTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDIT 197          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DCXR_RAT (L-xylulose reductase OS=Rattus norvegicus GN=Dcxr PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            L G  ALVTG  KG+G + V  L   GA V   SRT  +L+  +   +  G++    VC D++     +  ++ V     G +++ VNN   + L+P LE   E      + NF +   + Q+    + A G   +IV +SS     +    TVY +TKGA++ L K +A E     IR N+V P  + TP
Sbjct:    5 LAGRRALVTGAGKGIGRSTVLALQAAGAQVVAVSRTREDLDSLVR--ECPGVE---PVCVDLADWEATEQALSNV-----GPVDLLVNNAAVATLQPFLEVTKEACDTSFNVNFRAVVQVSQIVARGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTP 185          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: DCXR_MOUSE (L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 59/191 (30.89%), Postives = 93/191 (48.69%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGA-ASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTP 687
            L G  ALVTG  KG+G + V  L   GA V   SRT  +L++ +   +  G++    VC D++     +  ++ V     G +++ VNN   ++L+P LE   E      + N  +   + Q+    + A G   +IV +SS     +    TVY +TKGA++ L K +A E     IR N+V P  + TP
Sbjct:    5 LAGRRALVTGAGKGIGRSTVLALKAAGAQVVAVSRTREDLDDLVR--ECPGVE---PVCVDLADWEATEQALSNV-----GPVDLLVNNAAVALLQPFLEVTKEACDTSFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTP 185          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 59/196 (30.10%), Postives = 97/196 (49.49%), Query Frame = 1
Query:  115 WSLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTE-TELNECIHHLQMKGLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASG-AASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            +SL+G  A+VTG   GLG  +   L+  G  +   +  E TE  E +  L  + L +T  +  +   P    L++   + F G ++I VNN G    +  LE++ +D+  VM+ N +S F + Q A     A G    I+ ++S L          Y+A+K  +  + + +A EWAK NI  N++AP Y+ T  T+
Sbjct:    6 FSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIP---ALLDRAVAEF-GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQ 197          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 56/194 (28.87%), Postives = 96/194 (49.48%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQ-LAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRTPFTE 696
            L    A+VTGG++G+G  + +  +  GA V      E         L  K G KV+ ++ DVS        +    + + G +++ VNN G +     +  + E++S V+ TN  S +++C  +  P+++A   A IV +SS +G+  +   T Y+A K  +   +K L+ E    NIR N +AP +I T  T+
Sbjct:    5 LVNKAAIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEY-GTIDVVVNNAGITRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKARSGA-IVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTK 196          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: CBR2_MOUSE (Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cbr2 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 1
Query:  118 SLQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMKGLKVTGSVC-DVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQL-AHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQLAKNLACEWAKDNIRTNSVAPWYIRT 684
            +  G+ ALVTG  KG+G   V+ L   GA V   +RT ++L       +  G++    VC D+      +  +  +     G +++ VNN    +++P LE   E F    S N  S F + Q+ A  ++      SIV +SS +  V+      YS+TKGAM  L K +A E     IR NSV P  + T
Sbjct:    4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK--ECPGIE---PVCVDLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLT 184          
BLAST of FC930789 vs. ExPASy Swiss-Prot
Match: PECR_MOUSE (Peroxisomal trans-2-enoyl-CoA reductase OS=Mus musculus GN=Pecr PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 56/192 (29.17%), Postives = 86/192 (44.79%), Query Frame = 1
Query:  121 LQGMTALVTGGTKGLGLAVVEELSMLGATVHTCSRTETELNECIHHLQMK-----GLKVTGSVCDVSSRPQRQTLINTVSSLFNGKLNIFVNNVGTSVLKPTLEYNAEDFSLVMSTNFESAFHLCQLAHPLLRASGAASIVLMSSALGIVSANVGTVYSATKGAMNQ----LAKNLACEWAKDNIRTNSVAP 669
            L+   A+VTGG  G+G AV  EL  LG  V   SR    L   +  L+         +V+   C++    +   L+ +  + + GK+N  VNN G   + P  +  A+ +  V+ TN    F++C+  +         SIV +     IV  N G   +A  GA  +    L K++A  WA   +R N VAP
Sbjct:   16 LKNQVAVVTGGGTGIGKAVSRELLHLGCNVVIASRKLDRLTAAVDELRASLPPSSSAEVSAIQCNIRKEEEVSNLVKSTLAKY-GKINFLVNNGGGQFMAPVEDITAKGWHAVIETNLTGTFYMCKEVYNSWMREHGGSIVNI-----IVLLNNGFPTAAHTGAAREGVYNLTKSMALAWASSGVRINCVAP 201          
The following BLAST results are available for this feature:
BLAST of FC930789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
Y2567_STAAR3.633e-1425.27Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]
Y182_METEA3.633e-1431.25Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
FABG_CHLPN3.633e-1430.413-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
Y4MP_RHISN4.745e-1430.85Uncharacterized short-chain type dehydrogenase/red... [more]
DCXR_RAT4.745e-1431.41L-xylulose reductase OS=Rattus norvegicus GN=Dcxr ... [more]
DCXR_MOUSE4.745e-1430.89L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 ... [more]
KDUD_ECOLI6.197e-1430.102-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
FABG_CHLMU6.197e-1428.873-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
CBR2_MOUSE6.197e-1431.41Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cb... [more]
PECR_MOUSE8.094e-1429.17Peroxisomal trans-2-enoyl-CoA reductase OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionC34109A10EF PostHarvP1 Citrus clementina cDNA clone C34109A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930789 ID=FC930789; Name=FC930789; organism=Citrus clementina; type=EST; length=696bp
GAAGCAAACTAAGGCAATATAATAGCGGCCAGCAATACTAGAAGAGGAAG
AGACAGAGCAGAGATCAGAATGGCTCAGCCTCAGCAGACAGAGAGCCATA
GCAGGCAAAACAGATGGAGTCTTCAGGGCATGACAGCTCTTGTTACTGGC
GGCACCAAAGGACTCGGGCTTGCTGTTGTAGAGGAACTGTCAATGCTAGG
CGCCACTGTGCATACATGCTCCAGGACTGAAACAGAGCTTAATGAATGTA
TACATCACCTGCAGATGAAAGGTTTGAAAGTCACCGGTTCAGTCTGTGAT
GTATCGTCTCGACCTCAAAGACAGACGCTAATCAACACAGTCTCCTCTCT
GTTTAATGGCAAACTTAACATCTTTGTAAACAATGTTGGAACAAGTGTAC
TAAAGCCAACTCTCGAGTACAATGCTGAAGATTTTTCATTAGTAATGTCT
ACAAATTTCGAGTCTGCCTTCCACTTATGTCAACTTGCACATCCTCTGTT
GAGAGCTTCTGGGGCAGCAAGCATTGTTCTCATGTCTTCAGCACTAGGCA
TTGTATCAGCAAACGTTGGAACCGTCTATTCAGCTACTAAAGGAGCAATG
AATCAACTTGCAAAAAATTTGGCATGTGAGTGGGCAAAAGACAACATAAG
GACCAATTCTGTCGCTCCTTGGTACATCAGAACTCCCTTTACTGAA
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