FC930795

Overview
NameFC930795
Unique NameFC930795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930795 vs. ExPASy Swiss-Prot
Match: YFHB_BACSU (Uncharacterized isomerase yfhB OS=Bacillus subtilis GN=yfhB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 1 
Query:  103 DAFTDSAFKGNPAAVCLLEEDRDEEWLQAVASEFNISQTCYLTRLTAADSPNPRFRLRWFTPVAEVELCGHATLAAAHTLFSRGLVNS-NIIEFATLSGILTAK 411
            +AFT S  KGNPA V L  +D  E+ +Q +A     S+T ++ +  +AD       LR+FTP  E+ LCGHAT+A+ + L  +G++ S       T +GIL  K
Sbjct:   10 EAFTSSPGKGNPAGVVLQGDDYTEDEMQIIAERAGYSETSFIRKSESAD-----LELRYFTPGHEMNLCGHATVASLYALCEKGMLESGKTYSIQTKAGILPVK 108
The following BLAST results are available for this feature:
BLAST of FC930795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YFHB_BACSU8.622e-1238.46Uncharacterized isomerase yfhB OS=Bacillus subtili... [more]

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Properties
Property NameValue
Genbank descriptionC34109B04EF PostHarvP1 Citrus clementina cDNA clone C34109B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930795 ID=FC930795; Name=FC930795; organism=Citrus clementina; type=EST; length=750bp
GGAGGGTTTCATCTCTGCAACTCCAAGTTTCACTTGTCAAACTCTAAACT
TCATTCTTTATTCTGCAACATGGCCAAGAAGCTCGTACAATACTCTGTGG
TGGATGCTTTTACTGACTCAGCTTTCAAGGGGAACCCGGCAGCGGTTTGT
TTGTTAGAGGAAGATAGAGATGAAGAATGGCTACAAGCAGTGGCTTCTGA
GTTCAATATCTCCCAGACCTGTTACTTGACTCGCCTTACTGCTGCTGACT
CTCCTAATCCGAGGTTCCGTCTTAGATGGTTCACTCCTGTTGCTGAGGTT
GAACTTTGTGGTCATGCAACATTAGCAGCTGCACACACTCTCTTTTCGAG
AGGTTTGGTAAACTCCAACATAATTGAATTTGCCACACTGTCTGGAATTC
TAACAGCCAAAAAAGATCCAGATGTTAAGGCGATGAATGACTCTAATTCA
CAGAATGGAGAAGCACAAGAGTGCTATTTTATTGAATTGGATTTTCCTAC
AGTTCCAACTACTGATTTCAATTTTTCTGAGGTTTCATTAATTCATAAGG
CTTTGAGTGTTTCTTCAGTCATGGATATGAAGATAACAACTACCTCAGGA
GACATCTTTGTGGTGCTCCCATCGGCGAAATCTGTTACAGACGTGGAGCC
ACAGCTTGATGAAATACGAAAATGTCCTGGAAAGAGCATAATTGTTTCAG
GGCTTGCTCCTCAGAGTCTGGATTTGATTTTATAGCCGATTCTCTGCCCT
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