FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRPN (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pneumoniae GN=prs2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KLF+  +N  ++Q+IA  +GV LGK++ ++F+DGEI V ++ESVRG DVY++Q T  P N +LMELLI
Sbjct:    7 MKLFALNSNQEIAQKIAQAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFPVNNHLMELLI 75          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRA5 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype V GN=prs2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 34/72 (47.22%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            + +IKLFS TAN  ++++I+   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P N+NL ELLI
Sbjct:    7 DKQIKLFSLTANREIAEKISQASGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFPVNDNLWELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRA3 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype III GN=prs2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 34/72 (47.22%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            + +IKLFS TAN  ++++I+   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P N+NL ELLI
Sbjct:    7 DKQIKLFSLTANREIAEKISQASGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFPVNDNLWELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_LACLA (Ribose-phosphate pyrophosphokinase 2 OS=Lactococcus lactis subsp. lactis GN=prs2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12
Identity = 33/73 (45.21%), Postives = 56/73 (76.71%), Query Frame = 1
Query:  454 TNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +++ +KLF+  +NP L+++I+ + GV LGK++ K+F+DGEI + ++ESVR  D+++VQ T  P N++L ELLI
Sbjct:    4 SDSHLKLFALNSNPGLAEKISQFTGVPLGKLSSKQFSDGEIMINMEESVRSQDIFIVQSTSCPVNDHLWELLI 76          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_ENTFA (Ribose-phosphate pyrophosphokinase 2 OS=Enterococcus faecalis GN=prs2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12
Identity = 33/72 (45.83%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            ++ +++FS  AN  L+++IA  +G ELGK  +++F+DGEI + ++ES+RG  VY++Q T  P N++LMELLI
Sbjct:    7 DDTLRIFSLNANRPLAEKIAASVGTELGKSTVRQFSDGEIQINIEESIRGDHVYIIQATNAPVNDHLMELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: PRPS3_HUMAN (Ribose-phosphate pyrophosphokinase 3 OS=Homo sapiens GN=PRPS1L1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.860e-12
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C   N++LMELLI
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGEINDSLMELLI 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_RHIME (Ribose-phosphate pyrophosphokinase OS=Rhizobium meliloti GN=prs PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12
Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +K+F+G +N  L++ I  Y+ + LGK  ++RFAD EI+V++ E+VRG DV++VQ T  P N++LMELLI
Sbjct:    1 MKVFAGNSNRLLAEAICNYLNLPLGKATVRRFADQEIFVEIGENVRGEDVFIVQSTSFPTNDHLMELLI 69          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS2_STRP1 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M1 GN=prs2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12
Identity = 34/75 (45.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  448 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            R  + +IKLFS T+N  ++++IA   G+ LGK++ ++F++GEI + ++E+VRG D+Y++Q T  P N+NL ELLI
Sbjct:    4 RYADKQIKLFSLTSNLPIAEKIAKAAGIPLGKMSSRQFSNGEIMINIEETVRGDDIYIIQSTSFPVNDNLWELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CAUCR (Ribose-phosphate pyrophosphokinase OS=Caulobacter crescentus GN=prs PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KL SG +N  LSQ IA Y+ + L +  ++RFAD E++V + E+VRG DV+++Q T  P N+NLMELLI
Sbjct:    1 MKLLSGNSNRPLSQAIAEYLDMPLTRAQVRRFADLEVFVTIDENVRGEDVFVIQSTSYPANDNLMELLI 69          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CAUCN (Ribose-phosphate pyrophosphokinase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=prs PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KL SG +N  LSQ IA Y+ + L +  ++RFAD E++V + E+VRG DV+++Q T  P N+NLMELLI
Sbjct:    1 MKLLSGNSNRPLSQAIAEYLDMPLTRAQVRRFADLEVFVTIDENVRGEDVFVIQSTSYPANDNLMELLI 69          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
KPRS2_STRPN1.090e-1252.17Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRA51.090e-1247.22Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRA31.090e-1247.22Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_LACLA1.090e-1245.21Ribose-phosphate pyrophosphokinase 2 OS=Lactococcu... [more]
KPRS2_ENTFA1.424e-1245.83Ribose-phosphate pyrophosphokinase 2 OS=Enterococc... [more]
PRPS3_HUMAN1.860e-1253.62Ribose-phosphate pyrophosphokinase 3 OS=Homo sapie... [more]
KPRS_RHIME2.429e-1249.28Ribose-phosphate pyrophosphokinase OS=Rhizobium me... [more]
KPRS2_STRP12.429e-1245.33Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS_CAUCR3.172e-1250.72Ribose-phosphate pyrophosphokinase OS=Caulobacter ... [more]
KPRS_CAUCN3.172e-1250.72Ribose-phosphate pyrophosphokinase OS=Caulobacter ... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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