FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_HYPNA (Ribose-phosphate pyrophosphokinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=prs PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +KL S  AN  LS  IA Y+ + L +  +K FAD EI+V++ E+VRG DV+++Q T  P N+NLM+LLI
Sbjct:    1 MKLISCNANRPLSDAIADYLDMRLTRSEVKTFADQEIFVRIDENVRGEDVFVIQSTSYPANDNLMQLLI 69          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_STRA5 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus agalactiae serotype V GN=prs1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 29/71 (40.85%), Postives = 54/71 (76.06%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            + +KLF+ ++N  L+++++  +G+ LG+  +++F+DGEI V ++ES+RG  V+++Q T  P N+NLME+LI
Sbjct:    4 SNLKLFALSSNKELAKKVSQTIGIPLGQSTVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILI 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_STRA3 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus agalactiae serotype III GN=prs1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 29/71 (40.85%), Postives = 54/71 (76.06%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            + +KLF+ ++N  L+++++  +G+ LG+  +++F+DGEI V ++ES+RG  V+++Q T  P N+NLME+LI
Sbjct:    4 SNLKLFALSSNKELAKKVSQTIGIPLGQSTVRQFSDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILI 74          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_RHOSK (Ribose-phosphate pyrophosphokinase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=prs PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKI------NIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N  KL SG AN  L++ IA  M V  G         ++RF D EI+V++ E+VRG D+Y++QPT  P N+NLMELLI
Sbjct:    2 NEPKLISGNANLTLAKSIARRMSVHRGMAVSLVDARVERFNDQEIFVEVYENVRGEDMYVIQPTSNPANDNLMELLI 78          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
KPRS_HYPNA5.982e-1149.28Ribose-phosphate pyrophosphokinase OS=Hyphomonas n... [more]
KPRS1_STRA55.982e-1140.85Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS1_STRA35.982e-1140.85Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS_RHOSK7.813e-1148.05Ribose-phosphate pyrophosphokinase OS=Rhodobacter ... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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