FC930796

Overview
NameFC930796
Unique NameFC930796
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_THETN (Ribose-phosphate pyrophosphokinase OS=Thermoanaerobacter tengcongensis GN=prs PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 1
Query:  460 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N +K+F+G +NP L+ EIA ++G++L    +  F+DGEI V++ ESVRG  V+++Q TC P N NLMELLI
Sbjct:    6 NSLKIFTGNSNPKLASEIAEHLGLKLADSEVGTFSDGEISVRIGESVRGASVFVIQSTCAPVNNNLMELLI 76          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_LEPIN (Ribose-phosphate pyrophosphokinase OS=Leptospira interrogans GN=prs PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 32/72 (44.44%), Postives = 57/72 (79.17%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N  I +F+G +N  +++EI  ++G++ GKIN+K+F+DGEI V+++++VRG +V++VQ T  P N++LMEL++
Sbjct:    2 NGDIAVFAGNSNKQIAEEICTHLGIQSGKINLKKFSDGEISVKIEDNVRGKEVFIVQSTSAPANDHLMELIL 73          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_LEPIC (Ribose-phosphate pyrophosphokinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=prs PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 32/72 (44.44%), Postives = 57/72 (79.17%), Query Frame = 1
Query:  457 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            N  I +F+G +N  +++EI  ++G++ GKIN+K+F+DGEI V+++++VRG +V++VQ T  P N++LMEL++
Sbjct:    2 NGDIAVFAGNSNKQIAEEICTHLGIQSGKINLKKFSDGEISVKIEDNVRGKEVFIVQSTSAPANDHLMELIL 73          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS1_ENTFA (Ribose-phosphate pyrophosphokinase 1 OS=Enterococcus faecalis GN=prs1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 37/70 (52.86%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  463 RIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            R+K+FS  +N  L+++IA  +GVELGK ++ +F+DGEI V ++ES+RG  VY++Q T  P N+NLMELLI
Sbjct:    9 RLKIFSLNSNRPLAEKIADAVGVELGKCSVTQFSDGEIQVNIEESIRGAHVYVIQSTSSPVNDNLMELLI 78          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BORPA (Ribose-phosphate pyrophosphokinase OS=Bordetella parapertussis GN=prs PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14
Identity = 31/67 (46.27%), Postives = 53/67 (79.10%), Query Frame = 1
Query:  472 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +F+GTAN  L+ ++  ++ + LGK+ + RF+DGE+ V++ E+VRG DV+++QPTC P N+NLME+++
Sbjct:    2 IFTGTANTRLAVDVVNHLDMSLGKMTVGRFSDGEVMVEINENVRGKDVFVLQPTCAPTNDNLMEIMV 68          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_BORBR (Ribose-phosphate pyrophosphokinase OS=Bordetella bronchiseptica GN=prs PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14
Identity = 31/67 (46.27%), Postives = 53/67 (79.10%), Query Frame = 1
Query:  472 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +F+GTAN  L+ ++  ++ + LGK+ + RF+DGE+ V++ E+VRG DV+++QPTC P N+NLME+++
Sbjct:    2 IFTGTANTRLAVDVVNHLDMSLGKMTVGRFSDGEVMVEINENVRGKDVFVLQPTCAPTNDNLMEIMV 68          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_XANCP (Ribose-phosphate pyrophosphokinase OS=Xanthomonas campestris pv. campestris GN=prs PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  472 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +FSG AN  L+Q I   +GV +GK  + RF+DGE+ V+++ESVR  +V+++QPTC P  ENLMELL+
Sbjct:    9 VFSGNANKPLAQSICKELGVRMGKALVTRFSDGEVQVEIEESVRRQEVFVIQPTCAPSAENLMELLV 75          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_XANAC (Ribose-phosphate pyrophosphokinase OS=Xanthomonas axonopodis pv. citri GN=prs PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  472 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            +FSG AN  L+Q I   +GV +GK  + RF+DGE+ V+++ESVR  +V+++QPTC P  ENLMELL+
Sbjct:    9 VFSGNANKPLAQSICKELGVRMGKALVTRFSDGEVQVEIEESVRRQEVFVIQPTCAPSAENLMELLV 75          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_PASMU (Ribose-phosphate pyrophosphokinase OS=Pasteurella multocida GN=prs PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 35/69 (50.72%), Postives = 51/69 (73.91%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELLI 672
            IKLF+G A P L++ I+  + + LG   + RF+DGEI VQ+ E+VRG DV+++Q TC P N+NLMEL++
Sbjct:    4 IKLFTGNATPELAKRISERLYLSLGDATVGRFSDGEIQVQINENVRGSDVFIIQSTCAPTNDNLMELIV 72          
BLAST of FC930796 vs. ExPASy Swiss-Prot
Match: KPRS_CHRVO (Ribose-phosphate pyrophosphokinase OS=Chromobacterium violaceum GN=prs PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.781e-14
Identity = 32/68 (47.06%), Postives = 53/68 (77.94%), Query Frame = 1
Query:  466 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPGNENLMELL 669
            + +F+GTANP L+Q +  ++ + LG+ ++ +F+DGE+ V+L E+VRG DV+++Q TC P N+NLME+L
Sbjct:    7 LMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQSTCAPTNDNLMEIL 74          
The following BLAST results are available for this feature:
BLAST of FC930796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
KPRS_THETN3.389e-1450.70Ribose-phosphate pyrophosphokinase OS=Thermoanaero... [more]
KPRS_LEPIN3.389e-1444.44Ribose-phosphate pyrophosphokinase OS=Leptospira i... [more]
KPRS_LEPIC3.389e-1444.44Ribose-phosphate pyrophosphokinase OS=Leptospira i... [more]
KPRS1_ENTFA3.389e-1452.86Ribose-phosphate pyrophosphokinase 1 OS=Enterococc... [more]
KPRS_BORPA4.426e-1446.27Ribose-phosphate pyrophosphokinase OS=Bordetella p... [more]
KPRS_BORBR4.426e-1446.27Ribose-phosphate pyrophosphokinase OS=Bordetella b... [more]
KPRS_XANCP5.781e-1452.24Ribose-phosphate pyrophosphokinase OS=Xanthomonas ... [more]
KPRS_XANAC5.781e-1452.24Ribose-phosphate pyrophosphokinase OS=Xanthomonas ... [more]
KPRS_PASMU5.781e-1450.72Ribose-phosphate pyrophosphokinase OS=Pasteurella ... [more]
KPRS_CHRVO5.781e-1447.06Ribose-phosphate pyrophosphokinase OS=Chromobacter... [more]

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Properties
Property NameValue
Genbank descriptionC34109B05EF PostHarvP1 Citrus clementina cDNA clone C34109B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930796 ID=FC930796; Name=FC930796; organism=Citrus clementina; type=EST; length=674bp
GATGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGC
AACCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAA
GAAAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCT
GAAACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTC
ACAATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTT
TCGGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCT
CGGGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGC
ATTGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGA
CGCTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGA
ACTACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCT
TTCCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACA
TAAAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTT
AGAGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCCGGCAATGA
AAATCTCATGGAGCTTTTGATAAT
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